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BaseInfo

ncRNA ID novel_ahy_miR132
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:101412619-101412786 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UAACAAUUGAGAGGAUCCAUUCCC - 24
Stem-loop(if miRNA) --                  U  UUU  C         A         A      C   ----------A  AA       AG  GGAC
  GAAUGGAUCCUCUCAAUU UU   AA AAUUGAGAG GUAAAGUGU AUUUCU ACC           UU  UUUUAUA  UG    A
  |||||||||||||||||| ||   || ||||||||| ||||||||| |||||| |||           ||  |||||||  ||
  CUUACCUAGGAGAGUUAA AA   UU UUAACUCUC CAUUUCACA UAGAGA UGG           AG  AGAGUAU  AU    A
CC                  C  UUU  U         A         C      U   GAAGUAAUAAG  AG       AA  AAAA
Stem-loop sequence GAAUGGAUCCUCUCAAUUUUUUUUAACAAUUGAGAGAGUAAAGUGUAAUUUCUCACCAUUAAUUUUAUAAGUGGGACAAAAAAUAAAUAUGAGAGAGAGAAUAAUGAAGGGUUAGAGAUCACACUUUACACUCUCAAUUUUUUUUAACAAUUGAGAGGAUCCAUUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ721475.1
ncRNA:24   CCCUUACCUAGGAGAGUUAACAAU   1
  *|*|||||||||||||||||*|||
targets:328   CGUAAUGGAUCCUCUCAAUUAUUA   351

1.5 TSA: Arachis hypogaea CL1Contig491.Arhy mRNA sequence NA coding protein psRNATarget