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BaseInfo

ncRNA ID novel_ahy_miR128
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:112451020-112451136 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 94 - AAGAAGCAGUAGAAGAUGAGAAGG - 117
Stem-loop(if miRNA) --   A        CU  U       AUUUACA      UCUCU U        UUUUUUUU
  UUC UCGUCUUC  CU CUUCUUC       UUCUUU     C GUUUUAUU        C
  ||| ||||||||  || |||||||       ||||||     | ||||||||        A
  AAG AGUAGAAG  GA GAAGAAG       AAGAAG     G UAAAGUGG        A
GG   -        AU  C       -------      UUUUU C        UAUUUUUU
Stem-loop sequence UUCAUCGUCUUCCUCUUCUUCUUCAUUUACAUUCUUUUCUCUCUGUUUUAUUUUUUUUUUCAAUUUUUUAUGGUGAAAUCGUUUUUGAAGAAGAAGAAGCAGUAGAAGAUGAGAAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01032820.1
ncRNA:24   GGAAGAGUAGAAGAUGACGAAGAA   1
  =|||=||*||||||=|||||||||
targets:330   UCUUUUCUUCUUCUGCUGCUUCUU   353

2.5 TSA: Arachis hypogaea Unigene32842 mRNA sequence NA coding protein psRNATarget
JR558932.1
ncRNA:24   GGAAGAGUAGAAGAUGACGAAGAA   1
  =|||=||*||||||=|||||||||
targets:44   UCUUUUCUUCUUCUGCUGCUUCUU   67

2.5 TSA: Arachis hypogaea Ahy.Unigene18841 mRNA sequence NA coding protein psRNATarget
GAER01027260.1
ncRNA:24   GGAAGAGUAGAAGAUGACGAAGAA   1
  =|||=||*||||||=|||||||||
targets:59   UCUUUUCUUCUUCUGCUGCUUCUU   82

2.5 TSA: Arachis hypogaea Unigene27278 mRNA sequence NA coding protein psRNATarget
EZ723337.1
ncRNA:24   GGA--AGAGUAGAAGAUGACGAAGAA   1
  |||--||||*|||||*||||||||||
targets:423   CCUCCUCUCCUCUUCCACUGCUUCUU   448

2.5 TSA: Arachis hypogaea CL1Contig2353.Arhy mRNA sequence NA coding protein psRNATarget