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BaseInfo

ncRNA ID novel_ahy_miR124
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A09:12965355-12965484 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - CGUUAGGGACUUAAAUAAGACGAA - 24
Stem-loop(if miRNA) --    C                            AC     G  A  C         GAA    U
  CGUC UAUUUAAGUCCCUAACGUUUCAAAAUUG  UCAAU UU UC UGCUGUUAG   UCUG U
  |||| ||||||||||||||||||||||||||||  ||||| || || |||||||||   ||||
  GCAG AUAAAUUCAGGGAUUGCAAAGUUUUAGC  AGUUA AA AG GCGACAGUU   AGGC A
AA    A                            AA     A  C  C         --A    A
Stem-loop sequence CGUCCUAUUUAAGUCCCUAACGUUUCAAAAUUGACUCAAUGUUAUCCUGCUGUUAGGAAUCUGUUAACGGAAUUGACAGCGCGACAAAAUUGAAACGAUUUUGAAACGUUAGGGACUUAAAUAAGACGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01050950.1
ncRNA:24   AAGCAGAAUAAAUUCAGGGAUUGC   1
  *|||||*|||||||||||||||||
targets:531   AUCGUCCUAUUUAAGUCCCUAACG   554

1.0 TSA: Arachis hypogaea Unigene50988 mRNA sequence NA coding protein psRNATarget
GAER01050818.1
ncRNA:24   AAGCAGAAUAAAUUCAGGGAUUGC   1
  *|||||*|||||||||||||||||
targets:220   AUCGUCCUAUUUAAGUCCCUAACG   243

1.0 TSA: Arachis hypogaea Unigene50856 mRNA sequence NA coding protein psRNATarget
JR588190.1
ncRNA:24   AAGCAGAAUAAAUUCAGGGAUUGC   1
  *|||||*|||||||||||||||||
targets:108   AUCGUCCUAUUUAAGUCCCUAACG   131

1.0 TSA: Arachis hypogaea Ahy.Unigene56618 mRNA sequence NA coding protein psRNATarget
JR581961.1
ncRNA:24   AAGCAGAAUAAAUUCAGGGAUUGC   1
  *|||||*||||||||||=||||||
targets:182   AUCGUCCUAUUUAAGUCUCUAACG   205

2.5 TSA: Arachis hypogaea Ahy.Unigene47841 mRNA sequence NA coding protein psRNATarget
GAER01025961.1
ncRNA:21   CAGAAUAAAUUCAGGGAUUGC   1
  |||*|||||||||=|||||||
targets:1   GUCCUAUUUAAGUUCCUAACG   21

2.5 TSA: Arachis hypogaea Unigene25978 mRNA sequence NA coding protein psRNATarget
GAER01000641.1
ncRNA:21   CAGAAUAAAUUCAGGGAUUGC   1
  |||*|||||||||=|||||||
targets:1   GUCCUAUUUAAGUUCCUAACG   21

2.5 TSA: Arachis hypogaea Unigene641 mRNA sequence NA coding protein psRNATarget