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BaseInfo

ncRNA ID novel_ahy_miR123
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:106117098-106117156 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - GAUCCGAUCGGAUCGAAUUCGGCC - 24
Stem-loop(if miRNA) --    C        -   -     GCCUG
  GAUC GAUCGGAU CGA AUUCG     A
  |||| |||||||| ||| |||||     A
  CUAG CUAGCCUA GCU UAAGU     A
GC    C        U   A     GUUAA
Stem-loop sequence GAUCCGAUCGGAUCGAAUUCGGCCUGAAAAAUUGUGAAUAUCGUAUCCGAUCCGAUCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ752603.1
ncRNA:24   CCGGCUUAAGCUAGGCUAGCCUAG   1
  ***|*=||||||||*|||||||||
targets:43   ACACAGAUUCGAUCGGAUCGGAUC   66

2.5 TSA: Arachis hypogaea CL4330Contig2.Arhy mRNA sequence NA coding protein psRNATarget
EZ722037.1
ncRNA:24   CCGGCUUAAG-CUAGGCUAGCCUAG   1
  **=|*|*|||-||||||||||||||
targets:510   CUUCAACUUCCGAUCCGAUCGGAUC   534

3.0 TSA: Arachis hypogaea CL1Contig1053.Arhy mRNA sequence NA coding protein psRNATarget