ncRNA ID | novel_ahy_miR118 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A06:89753940-89754128 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 166 - UUACACUGUAAACAAGAUAAGGCU - 189 |
Stem-loop(if miRNA) |
--   UA     C          ----        A                   C         A       A      UGUGGU    UGUUU      U   CCU  UAUCU GUUUAUAGUG    CAAAAUAA CUUGUGCAUAUCUUGUUUA ACUAUAAAC AGAUAAG CACGUU      UGCA     CUCGUU A   |||  ||||| ||||||||||    |||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||      ||||     ||||||   GGA  AUAGA CAAAUGUCAC    GUUUUAUU GAACACGUAUAGAGCAAAU UGAUAUUUG UCUAUUC GUGCAA      AUGU     GAGCAA U UC   --     A          AUUU        C                   A         C       C      -----U    ----U      A |
Stem-loop sequence | CCUUAUAUCUCGUUUAUAGUGCAAAAUAAACUUGUGCAUAUCUUGUUUACACUAUAAACAAGAUAAGACACGUUUGUGGUUGCAUGUUUCUCGUUUAUAAACGAGUUGUAUAACGUGCCUUAUCUCGUUUAUAGUAUAAACGAGAUAUGCACAAGCUUAUUUUGUUUACACUGUAAACAAGAUAAGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01058827.1 |
|
1.0 | TSA: Arachis hypogaea Unigene58874 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR578749.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR574604.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR574604.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence | NA | coding protein | psRNATarget |