ncRNA ID | novel_ahy_miR116 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A01:56903221-56903427 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAUUUUAAAUAAUAAUAUCGACGG - 24 |
Stem-loop(if miRNA) |
--      U      AG     U       G AACG        --UUU      GCACAU            AGC      -    UUAAAC   UU  A         GUUGAU UUAUUA  UUAAA AUUGACG C    UUGUCGAU     AUUCAA      AUCGACGGCUUU   GUCGAU UUUA      AUA  AU GACAACA   |||||| ||||||  ||||| ||||||| |    ||||||||     ||||||      ||||||||||||   |||||| ||||      |||  || ||||||G   CAGCUA AAUAAU  AAUUU UAGCUGC G    AACAGCUA     UAAGUU      UAGCUGUCGGAA   CAGCUA AAAU      UAU  UA UUGUUGU GG      U      -A     -       A GAAA        UUAAC      --AUUU            AAA      U    -UGAAU   UU  G       |
Stem-loop sequence | GUUGAUUUUAUUAAGUUAAAUAUUGACGGCAACGUUGUCGAUUUUAUUCAAGCACAUAUCGACGGCUUUAGCGUCGAUUUUAUUAAACAUAUUAUAGACAACAGUGUUGUUGAUUUUAUUAAGUUAAAUAUCGACAAAAAGGCUGUCGAUUUUAUUGAAUCAAUUAUCGACAAAAAGGACGUCGAUUUUAAAUAAUAAUAUCGACGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR554516.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene14289 mRNA sequence | NA | coding protein | psRNATarget |