ncRNA ID | novel_ahy_miR114 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A05:4280655-4280867 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUUAACUGAUAGCAUACAUGAC - 24 |
Stem-loop(if miRNA) |
--AUA    C          C       A   C    UC    A  CG  A C  A    A    C      C   A          CUAUGUUAU    G   UA      UUAA UGAUAGCAUA AUGACAU UAA AUGU  AAUU GA  UU A UA AUAU UUUA GAAAAU UAU AAUUUAGUCA         AUUA GAA  A      |||| |||||||||| ||||||| ||| ||||  |||| ||  || | || |||| |||| |||||| ||| ||||||||||         |||| |||  G      AAUU ACUAUUGUAU UAUUGUG AUU UACA  UUAA CU  AA U GU UAUA AAAU CUUUUA AUA UUAAAUCAGU         UAAU UUU  A UUUGC    A          A       G   A    GA    C  AU  C A  C    C    A      A   A          AAAAGAAGU    G   UU |
Stem-loop sequence | AUAUUAACUGAUAGCAUACAUGACAUAUAACAUGUUCAAUUAGACGUUAACUAAAUAUAUUUACGAAAAUCUAUAAAUUUAGUCACUAUGUUAUAUUAGGAAUAAGAUUUUUGUAAUUGAAGAAAAUGACUAAAUUAAUAAAUUUUCAUAAACAUAUCUGAUCAAUAUCCAAUUAGACAUAUUAGGUGUUAUAUAUGUUAUCAAUUAACGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ747421.1 |
|
0.0 | TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |