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BaseInfo

ncRNA ID novel_ahy_miR114
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:4280655-4280867 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AUAUUAACUGAUAGCAUACAUGAC - 24
Stem-loop(if miRNA) --AUA    C          C       A   C    UC    A  CG  A C  A    A    C      C   A          CUAUGUUAU    G   UA
     UUAA UGAUAGCAUA AUGACAU UAA AUGU  AAUU GA  UU A UA AUAU UUUA GAAAAU UAU AAUUUAGUCA         AUUA GAA  A
     |||| |||||||||| ||||||| ||| ||||  |||| ||  || | || |||| |||| |||||| ||| ||||||||||         |||| |||  G
     AAUU ACUAUUGUAU UAUUGUG AUU UACA  UUAA CU  AA U GU UAUA AAAU CUUUUA AUA UUAAAUCAGU         UAAU UUU  A
UUUGC    A          A       G   A    GA    C  AU  C A  C    C    A      A   A          AAAAGAAGU    G   UU
Stem-loop sequence AUAUUAACUGAUAGCAUACAUGACAUAUAACAUGUUCAAUUAGACGUUAACUAAAUAUAUUUACGAAAAUCUAUAAAUUUAGUCACUAUGUUAUAUUAGGAAUAAGAUUUUUGUAAUUGAAGAAAAUGACUAAAUUAAUAAAUUUUCAUAAACAUAUCUGAUCAAUAUCCAAUUAGACAUAUUAGGUGUUAUAUAUGUUAUCAAUUAACGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   CAGUACAUACGAUAGUCAAUUAUA   1
  ||||||||||||||||||||||||
targets:727   GUCAUGUAUGCUAUCAGUUAAUAU   750

0.0 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget