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BaseInfo

ncRNA ID novel_ahy_miR111
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:50643219-50643284 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 20
Mature sequence(if miRNA) 47 - UGAAGUGUUUGGGGGAACUC - 66
Stem-loop(if miRNA) --       UG          A   A  UACAC
  GUUCCUC  AACGCUUCAU UAU UA     A
  |||||||  |||||||||| ||| ||
  CAAGGGG  UUGUGAAGUA GUA AU     U
CU       GU          A   A  UAUUA
Stem-loop sequence GUUCCUCUGAACGCUUCAUAUAUAUAUACACAUAUUAUUAAAUGAAUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR564482.1
ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1
  ***|||||||||||||||||
targets:176   AUCUUCCCCCAAACACUUCA   195

2.0 TSA: Arachis hypogaea Ahy.Unigene24594 mRNA sequence NA coding protein psRNATarget
GAER01031105.1
ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1
  ***|||||||||||||||||
targets:186   AUCUUCCCCCAAACACUUCA   205

2.0 TSA: Arachis hypogaea Unigene31126 mRNA sequence NA coding protein psRNATarget
EZ746578.1
ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1
  ||||||*=||||||||||||
targets:40   GAGUUCGUCCAAACACUUCA   59

2.5 TSA: Arachis hypogaea CL13917Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR540820.1
ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1
  |||**=||||||||||||||
targets:2741   GAGGAUCCCCAAACACUUCA   2760

3.0 TSA: Arachis hypogaea Ahy.Unigene89 mRNA sequence NA coding protein psRNATarget