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BaseInfo

ncRNA ID novel_ahy_miR107
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:468687-468786 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - ACUUCACGUGAAGUUGAUAGUCGA - 24
Stem-loop(if miRNA) --    C          G     C  U   U    A    AAA    GUCA
  ACUU ACGUGAAGUU AUAGU GA AGU GUUA AUGA   UUUA    A
  |||| |||||||||| ||||| || ||| |||| ||||   ||||
  UGAA UGUAUUUUAA UAUUA CU UCA UAAU UACU   AAAU    A
GC    A          A     A  C   C    C    --A    AACU
Stem-loop sequence ACUUCACGUGAAGUUGAUAGUCGAUAGUUGUUAAAUGAAAAUUUAGUCAAAUCAAUAAAAUCAUCUAAUCACUCUCAAUUAUAAAUUUUAUGUAAAGUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ730526.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|||||||||||||||||||||
targets:253   UCAACUAUCAACUUCACGUGAAGU   276

0.0 TSA: Arachis hypogaea CL1Contig9542.Arhy mRNA sequence NA coding protein psRNATarget
GAER01040999.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|||||||||||||||||||||
targets:142   UCAACUAUCAACUUCACGUGAAGU   165

0.0 TSA: Arachis hypogaea Unigene41030 mRNA sequence NA coding protein psRNATarget
JR556801.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|||||||||||||||||||||
targets:242   UCAACUAUCAACUUCACGUGAAGU   265

0.0 TSA: Arachis hypogaea Ahy.Unigene16625 mRNA sequence NA coding protein psRNATarget
EZ727045.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|||||||||||||||||||||
targets:1155   UCAACUAUCAACUUCACGUGAAGU   1178

0.0 TSA: Arachis hypogaea CL1Contig6061.Arhy mRNA sequence NA coding protein psRNATarget
GAER01025962.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|||||||||||||||||||||
targets:1330   UCAACUAUCAACUUCACGUGAAGU   1353

0.0 TSA: Arachis hypogaea Unigene25979 mRNA sequence NA coding protein psRNATarget
JR581646.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|=|||||||||||||||||||
targets:126   UCAAUUAUCAACUUCACGUGAAGU   149

0.0 TSA: Arachis hypogaea Ahy.Unigene47526 mRNA sequence NA coding protein psRNATarget
JR551010.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*=||||||||||||||||||||
targets:94   UCAGCUAUCAACUUCACGUGAAGU   117

0.0 TSA: Arachis hypogaea Ahy.Unigene10638 mRNA sequence NA coding protein psRNATarget
GAER01028527.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*=||||||||||||||||||||
targets:135   UCAGCUAUCAACUUCACGUGAAGU   158

0.0 TSA: Arachis hypogaea Unigene28545 mRNA sequence NA coding protein psRNATarget
EZ731737.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*==|||||||||||||||||||
targets:184   UCAGUUAUCAACUUCACGUGAAGU   207

0.0 TSA: Arachis hypogaea CL1Contig10753.Arhy mRNA sequence NA coding protein psRNATarget
GAER01015443.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  *|*=||||||||||||||||||||
targets:212   CCAGCUAUCAACUUCACGUGAAGU   235

0.0 TSA: Arachis hypogaea Unigene15451 mRNA sequence NA coding protein psRNATarget
EZ722257.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  *|*=||||||||||||||||||||
targets:190   CCAGCUAUCAACUUCACGUGAAGU   213

0.0 TSA: Arachis hypogaea CL1Contig1273.Arhy mRNA sequence NA coding protein psRNATarget
JR546132.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|*|||||||||||||||||||
targets:126   UCAAGUAUCAACUUCACGUGAAGU   149

0.0 TSA: Arachis hypogaea Ahy.Unigene5573 mRNA sequence NA coding protein psRNATarget
EZ755476.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|*|||||||||||||||||||
targets:1461   UCAAAUAUCAACUUCACGUGAAGU   1484

0.0 TSA: Arachis hypogaea CL780Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01025960.1
ncRNA:24   AG-CUGAUAGUUGAAGUGCACUUCA   1
  ||-||-|||||||||||||||||||
targets:1249   UCAGA-UAUCAACUUCACGUGAAGU   1272

0.0 TSA: Arachis hypogaea Unigene25977 mRNA sequence NA coding protein psRNATarget
GAER01054132.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*=*|||||||||||||||||||
targets:180   UCAGGUAUCAACUUCACGUGAAGU   203

0.0 TSA: Arachis hypogaea Unigene54173 mRNA sequence NA coding protein psRNATarget
GAER01025961.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*==|||||=|||||||||||||
targets:706   UCAGUUAUCAGCUUCACGUGAAGU   729

1.0 TSA: Arachis hypogaea Unigene25978 mRNA sequence NA coding protein psRNATarget
GAER01008692.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  |=*=|||||||||||||||||||*
targets:1   UUAGCUAUCAACUUCACGUGAAGA   24

1.0 TSA: Arachis hypogaea Unigene8699 mRNA sequence NA coding protein psRNATarget
GAER01053414.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|*|||=|||||||||||||||
targets:50   UCAAGUAUUAACUUCACGUGAAGU   73

1.0 TSA: Arachis hypogaea Unigene53453 mRNA sequence NA coding protein psRNATarget
JR585639.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|*|||=|||||||||||||||
targets:63   UCAAGUAUUAACUUCACGUGAAGU   86

1.0 TSA: Arachis hypogaea Ahy.Unigene52188 mRNA sequence NA coding protein psRNATarget
JR557125.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|||||||||||||*|||||||
targets:140   UCAACUAUCAACUUCAGGUGAAGU   163

1.5 TSA: Arachis hypogaea Ahy.Unigene16954 mRNA sequence NA coding protein psRNATarget
JR584453.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*=||||||||||||||||||*|
targets:11   UCAGCUAUCAACUUCACGUGAAUU   34

1.5 TSA: Arachis hypogaea Ahy.Unigene50333 mRNA sequence NA coding protein psRNATarget
EZ757695.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|*||||||=||||||||||||
targets:720   UCAAGUAUCAAUUUCACGUGAAGU   743

1.5 TSA: Arachis hypogaea CL11722Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR561947.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*=||||||||||||||||||*|
targets:8   UCAGCUAUCAACUUCACGUGAAAU   31

1.5 TSA: Arachis hypogaea Ahy.Unigene21974 mRNA sequence NA coding protein psRNATarget
GAER01057592.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*==||||||||||||*||||||
targets:153   UCAGUUAUCAACUUCACAUGAAGU   176

1.5 TSA: Arachis hypogaea Unigene57638 mRNA sequence NA coding protein psRNATarget
JR560456.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*==||||||||||||||*||||
targets:534   UCAGUUAUCAACUUCACGUAAAGU   557

1.5 TSA: Arachis hypogaea Ahy.Unigene20432 mRNA sequence NA coding protein psRNATarget
JR552149.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*|*||||||||||||*||||||
targets:206   UCAAAUAUCAACUUCACAUGAAGU   229

1.5 TSA: Arachis hypogaea Ahy.Unigene11811 mRNA sequence NA coding protein psRNATarget
GAER01000868.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ***=|*=|||||||||||||||||
targets:228   AGUGCAGUCAACUUCACGUGAAGU   251

2.0 TSA: Arachis hypogaea Unigene869 mRNA sequence NA coding protein psRNATarget
JR561152.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*==|||=|||||||||||||*|
targets:2   UCAGUUAUUAACUUCACGUGAAAU   25

2.5 TSA: Arachis hypogaea Ahy.Unigene21158 mRNA sequence NA coding protein psRNATarget
JR574742.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||*==||||||||||||*|||||*
targets:152   UCAGUUAUCAACUUCACAUGAAGC   175

2.5 TSA: Arachis hypogaea Ahy.Unigene37779 mRNA sequence NA coding protein psRNATarget
EZ742430.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  |=*|=||||||||||||*|||||*
targets:321   UUAAUUAUCAACUUCACAUGAAGA   344

2.5 TSA: Arachis hypogaea CL11350Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01055572.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ||**||||=||||||||*||||||
targets:26   UCAUCUAUUAACUUCACAUGAAGU   49

2.5 TSA: Arachis hypogaea Unigene55614 mRNA sequence NA coding protein psRNATarget
GAER01001304.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ***=|*||||||||||||||||*|
targets:196   GGUGCAAUCAACUUCACGUGAAAU   219

2.5 TSA: Arachis hypogaea Unigene1305 mRNA sequence NA coding protein psRNATarget
EZ731737.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  |**=|*||==||||||||||||||
targets:100   UAUGCAAUUGACUUCACGUGAAGU   123

3.0 TSA: Arachis hypogaea CL1Contig10753.Arhy mRNA sequence NA coding protein psRNATarget
JR570139.1
ncRNA:24   AGCUGAUAGUUGAAGUG-CACUUCA   1
  ||*=|||||||||||||-|||||||
targets:218   UCAGCUAUCAACUUCACAGUGAAGU   242

3.0 TSA: Arachis hypogaea Ahy.Unigene30458 mRNA sequence NA coding protein psRNATarget
GAER01042933.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ***=|*||=*||||||||||||||
targets:637   GGUGCAAUUCACUUCACGUGAAGU   660

3.0 TSA: Arachis hypogaea Unigene42964 mRNA sequence NA coding protein psRNATarget
GAER01004465.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  ***=|*=||=||||||||||||||
targets:52   GGUGCAGUCGACUUCACGUGAAGU   75

3.0 TSA: Arachis hypogaea Unigene4467 mRNA sequence NA coding protein psRNATarget
EZ733072.1
ncRNA:24   AGCUGAUAGUUGAAGUGCACUUCA   1
  |**|=*=||=||||||||||||||
targets:1624   UAUAUAGUCGACUUCACGUGAAGU   1647

3.0 TSA: Arachis hypogaea CL1Contig12088.Arhy mRNA sequence NA coding protein psRNATarget
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