Search result

BaseInfo

ncRNA ID novel_ahy_miR105
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:3297854-3297966 [+]
Reference genome Aradu_v1.0
Source SRR1323745;SRR2922381
Length 22
Mature sequence(if miRNA) 92 - UCAUUUUUGCAUGCAAUGAUCC - 113
Stem-loop(if miRNA) --   -     C      C     UC    -           AUUUUU   AACGCAUG
  AUC UUGCA GCAAAA UGAUG  AAUU AAUGGGUUCGG      GUG        C
  ||| ||||| |||||| |||||  |||| |||||||||||      |||
  UAG AACGU CGUUUU ACUAC  UUAA UUACCCAAGCC      CAC        A
CC   U     A      U     UA    C           ---GCU   CUUCUUCA
Stem-loop sequence AUCUUGCACGCAAAACUGAUGUCAAUUAAUGGGUUCGGAUUUUUGUGAACGCAUGCAACUUCUUCCACUCGCCGAACCCAUUCAAUUAUCAUCAUUUUUGCAUGCAAUGAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01012054.1
ncRNA:22   CCUAGUAACGUACGUUUUUACU   1
  |||||||||=||||||||||||
targets:30   GGAUCAUUGUAUGCAAAAAUGA   51

1.5 TSA: Arachis hypogaea Unigene12062 mRNA sequence NA coding protein psRNATarget