Search result

BaseInfo

ncRNA ID novel_ahy_miR100
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:18753203-18753292 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - UGACGGAAGAAAGAGAGCACA - 21
Stem-loop(if miRNA) --            -        AU     C   -  -  -----   U
  UGACGGAAGAAA GAGAGCAC  GCUGC AGA CA GU     CAU G
  |||||||||||| ||||||||  ||||| ||| || ||     |||
  ACUGUCUUUUUU CUCUCGUG  UGACG UCU GU CA     GUG U
UA            U        CG     U   U  A  UCUAU   U
Stem-loop sequence UGACGGAAGAAAGAGAGCACAUGCUGCCAGACAGUCAUUGUUGUGUAUCUACAUGUUCUUGCAGUGCGUGCUCUCUUUUUUUCUGUCAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01021457.1
ncRNA:21   ACACGAGAGAAAGAAGGCAGU   1
  **||=||||||||||||||*|
targets:65   CCUGUUCUCUUUCUUCCGUAA   85

2.5 TSA: Arachis hypogaea Unigene21468 mRNA sequence NA coding protein psRNATarget
JR545011.1
ncRNA:21   ACACGAGAGAAAGAAGGCAGU   1
  **||=||||||||||||||*|
targets:37   CCUGUUCUCUUUCUUCCGUAA   57

2.5 TSA: Arachis hypogaea Ahy.Unigene4411 mRNA sequence NA coding protein psRNATarget