Search result

BaseInfo

ncRNA ID	novel_ahy_miR96
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A05:5307608-5307800 [-]
Reference genome	Aradu_v1.0
Source	SRR1323745;SRR2922380
Length	21
Mature sequence(if miRNA)	1 - UUAUUUGGAUCAAAGAUUUCU - 21
Stem-loop(if miRNA)	--       CA          CUC    AC       A   A                     C            CUAAAAAA  AUACUAAUAAAAU   AAAUCUU  AUUCAAAUAA   CAAU  UACAUCU AGA ACUCUAUAGAAAUGUCUUCAU UAAUUUGUGUGG        CA             A   |||||||  ||||||||||   ||||  ||||||| ||| ||||||||||||||||||||| ||||||||||||        ||             U   UUUAGAA  UAGGUUUAUU   GUUA  GUGUAGA UUU UGAGAUAUUUUUACAGAAGUA AUUGAACACACC        CU             A UC       AC          AAA    CU       C   A                     A            ------AA  CAAAAGGUCAGUU
Stem-loop sequence	AAAUCUUCAAUUCAAAUAACUCCAAUACUACAUCUAAGAAACUCUAUAGAAAUGUCUUCAUCUAAUUUGUGUGGCUAAAAAACAAUACUAAUAAAAUAUAUUGACUGGAAAACUCAACCACACAAGUUAAAUGAAGACAUUUUUAUAGAGUAUUUCAGAUGUGUCAUUGAAAUUAUUUGGAUCAAAGAUUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01022453.1	ncRNA:21   UCUUUAGAAACUAGGUUUAUU   1   ||||||||||||||||||||| targets:1966   AGAAAUCUUUGAUCCAAAUAA   1986 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene22464 mRNA sequence	NA	coding protein	psRNATarget
GAER01046876.1	ncRNA:21   UCUUUAGAAACUAGGUUUAUU   1   |||=||||||||*|||||||| targets:794   AGAGAUCUUUGACCCAAAUAA   814 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene46911 mRNA sequence	NA	coding protein	psRNATarget
JR547347.1	ncRNA:21   UCUUUAGAAACUAGGUUUAUU   1   |*||||=*||||||||||||* targets:880   ACAAAUUGUUGAUCCAAAUAC   900 Target Full Sequence	3.0	TSA: Arachis hypogaea Ahy.Unigene6848 mRNA sequence	NA	coding protein	psRNATarget
EZ731649.1	ncRNA:21   UCUUUAGAAACUAGGUUUAUU   1   |*||||=*||||||||||||* targets:781   ACAAAUUGUUGAUCCAAAUAC   801 Target Full Sequence	3.0	TSA: Arachis hypogaea CL1Contig10665.Arhy mRNA sequence	NA	coding protein	psRNATarget