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BaseInfo

ncRNA ID novel_ahy_miR90
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A09:33319713-33319771 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UGAAAUUGAGGGACUUGAGCAGAA - 24
Stem-loop(if miRNA) UG G     ---    G         G  A
  U UGUUU   UUCU UAAUUUCAG UA U
  | |||||   |||| ||||||||| || U
  A ACGAG   AGGG GUUAAAGUC GU U
-A G     UUC    A         G  C
Stem-loop sequence UGUGUGUUUUUCUGUAAUUUCAGGUAAUUUCUGGCUGAAAUUGAGGGACUUGAGCAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01004445.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=|||||||||||||||||||||
targets:229   UUUUGCUCAAGUCCCUCAAUUUCA   252

0.0 TSA: Arachis hypogaea Unigene4447 mRNA sequence NA coding protein psRNATarget
EZ723108.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=|||||||||||||||||||||
targets:697   UUUUGCUCAAGUCCCUCAAUUUCA   720

0.0 TSA: Arachis hypogaea CL1Contig2124.Arhy mRNA sequence NA coding protein psRNATarget
EZ734449.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=||||||=||||||||||||||
targets:505   UUUUGCUCAGGUCCCUCAAUUUCA   528

1.0 TSA: Arachis hypogaea CL1Contig13465.Arhy mRNA sequence NA coding protein psRNATarget
EZ732572.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  *|=||||||=||||||||||||||
targets:380   CUUUGCUCAGGUCCCUCAAUUUCA   403

1.0 TSA: Arachis hypogaea CL1Contig11588.Arhy mRNA sequence NA coding protein psRNATarget
GAER01018561.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=|*||||=||||||||||||||
targets:830   UUUUUCUCAGGUCCCUCAAUUUCA   853

1.0 TSA: Arachis hypogaea Unigene18569 mRNA sequence NA coding protein psRNATarget
GAER01010215.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=|||||||||||||||||||=|
targets:3   UUUUGCUCAAGUCCCUCAAUUUUA   26

1.5 TSA: Arachis hypogaea Unigene10222 mRNA sequence NA coding protein psRNATarget
EZ747432.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=|||||||||||||||||||=|
targets:307   UUUUGCUCAAGUCCCUCAAUUUUA   330

1.5 TSA: Arachis hypogaea CL19836Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01003301.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=||||||=*|||||||||||||
targets:47   UUUUGCUCAGAUCCCUCAAUUUCA   70

2.0 TSA: Arachis hypogaea Unigene3302 mRNA sequence NA coding protein psRNATarget
JR549032.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=||||||=*|||||||||||||
targets:20   UUUUGCUCAGCUCCCUCAAUUUCA   43

2.0 TSA: Arachis hypogaea Ahy.Unigene8611 mRNA sequence NA coding protein psRNATarget
GAER01008365.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=||||||=|||=||||||||||
targets:12   UUUUGCUCAGGUCUCUCAAUUUCA   35

2.5 TSA: Arachis hypogaea Unigene8372 mRNA sequence NA coding protein psRNATarget
GAER01028448.1
ncRNA:24   AAGACGAGUUCAGGGAGUUAAAGU   1
  ||=|||||||*|||||*|||||||
targets:44   UUUUGCUCAAAUCCCUAAAUUUCA   67

2.5 TSA: Arachis hypogaea Unigene28466 mRNA sequence NA coding protein psRNATarget