Search result

BaseInfo

ncRNA ID ath-miRf10324-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CGGAUUGUGGAAUGUUUCAG - NA
Stem-loop(if miRNA)          U  C  U  C            CAUAUC   UCACCGGUUUAGGCGACCUA
UCACCAGGC CU AA CA UUCCACAAUCCG      CCG                    A
||||||||| || || || ||||||||||||      |||
AGUGGUUCG GA UU GU AAGGUGUUAGGC      UCU                    U
         U  C  U  -            ------   GCUUGUACCUCCGUAACUCG
Stem-loop sequence UCACCAGGCUCUCAAUCACUUCCACAAUCCGCAUAUCCCGUCACCGGUUUAGGCGACCUAAUGCUCAAUGCCUCCAUGUUCGUCUCGGAUUGUGGAAUGUUUCAGUGCUUGGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY091061.1
ncRNA:20   GACUUUGUAAGGUGUUAGGC   1
  ||||||||||||*|||||||
targets:49   CUGAAACAUUCCUCAAUCCG   68

1.5 Arabidopsis thaliana putative poly (ADP-ribose) polymerase (At2g31320) mRNA, complete cds NA coding protein psRNATarget
NM_179834.2
ncRNA:20   GACUUUGUAAGGUGUUAGGC   1
  ||||||||||||*|||||||
targets:71   CUGAAACAUUCCUCAAUCCG   90

1.5 Arabidopsis thaliana poly(ADP-ribose) polymerase 2 (PARP1), mRNA poly(ADP-ribose) polymerase 2(PARP1) coding protein psRNATarget