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BaseInfo

ncRNA ID novel_ahy_miR71
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:2944670-2944750 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UGAAGUUGAUAUCUGAAAGUCGUU - 24
Stem-loop(if miRNA) ----            C   A        A    AAAUUUA
    UGAAGUUGAUAU UGA AGUCGUUA AUGA       A
    |||||||||||| ||| |||||||| ||||       U
    AUUUCAACUAUA ACU UCAGUAAU UACU       C
GCAC            A   C        C    AAACUAA
Stem-loop sequence UGAAGUUGAUAUCUGAAAGUCGUUAAAUGAAAAUUUAAUCAAUCAAAUCAUCUAAUGACUCUCAAAUAUCAACUUUACACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01042933.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  |||||||*||||||||||||||||
targets:713   AACGACUCUCAGAUAUCAACUUCA   736

1.0 TSA: Arachis hypogaea Unigene42964 mRNA sequence NA coding protein psRNATarget
GAER01025960.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||||=||*||||||||||||||||
targets:1241   AACGGCUCUCAGAUAUCAACUUCA   1264

1.0 TSA: Arachis hypogaea Unigene25977 mRNA sequence NA coding protein psRNATarget
GAER01020058.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||*|=||*||||||||||||||||
targets:2272   AAGGGCUCUCAGAUAUCAACUUCA   2295

1.0 TSA: Arachis hypogaea Unigene20067 mRNA sequence NA coding protein psRNATarget
JR584453.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||=*||||||||*|||||||||||
targets:3   AAUAACUUUCAGCUAUCAACUUCA   26

1.5 TSA: Arachis hypogaea Ahy.Unigene50333 mRNA sequence NA coding protein psRNATarget
JR551010.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  |=|*=|||||||*|||||||||||
targets:86   AGCAGCUUUCAGCUAUCAACUUCA   109

1.5 TSA: Arachis hypogaea Ahy.Unigene10638 mRNA sequence NA coding protein psRNATarget
GAER01054132.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||||=||*||||=|||||||||||
targets:172   AACGGCUCUCAGGUAUCAACUUCA   195

2.5 TSA: Arachis hypogaea Unigene54173 mRNA sequence NA coding protein psRNATarget
GAER01057592.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  |||||||*||||*|||||||||||
targets:145   AACGACUCUCAGUUAUCAACUUCA   168

2.5 TSA: Arachis hypogaea Unigene57638 mRNA sequence NA coding protein psRNATarget
JR559052.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||=|=||*||||=|||||||||||
targets:49   AAUGGCUCUCAGGUAUCAACUUCA   72

2.5 TSA: Arachis hypogaea Ahy.Unigene18963 mRNA sequence NA coding protein psRNATarget
JR570139.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||||=||*||||*|||||||||||
targets:210   AACGGCUCUCAGCUAUCAACUUCA   233

2.5 TSA: Arachis hypogaea Ahy.Unigene30458 mRNA sequence NA coding protein psRNATarget
EZ731737.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||=||||*||||*|||||||||||
targets:176   AAUGACUCUCAGUUAUCAACUUCA   199

2.5 TSA: Arachis hypogaea CL1Contig10753.Arhy mRNA sequence NA coding protein psRNATarget
GAER01028527.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||||=||*||||*|||||||||||
targets:127   AACGGCUCUCAGCUAUCAACUUCA   150

2.5 TSA: Arachis hypogaea Unigene28545 mRNA sequence NA coding protein psRNATarget
JR561947.1
ncRNA:23   UGCUGAAAGUCUAUAGUUGAAGU   1
  |=||||*||||*|||||||||||
targets:1   AUGACUCUCAGCUAUCAACUUCA   23

2.5 TSA: Arachis hypogaea Ahy.Unigene21974 mRNA sequence NA coding protein psRNATarget
JR552149.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||||*||*|||*||||||||||||
targets:198   AACGUCUCUCAAAUAUCAACUUCA   221

2.5 TSA: Arachis hypogaea Ahy.Unigene11811 mRNA sequence NA coding protein psRNATarget
JR560456.1
ncRNA:24   UUGCUGAAAGUCUAUAGUUGAAGU   1
  ||=*|||*||||*|||||||||||
targets:526   AAUAACUCUCAGUUAUCAACUUCA   549

2.5 TSA: Arachis hypogaea Ahy.Unigene20432 mRNA sequence NA coding protein psRNATarget