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BaseInfo

ncRNA ID novel_ahy_miR64
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:6908110-6908204 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 72 - UUACACUGUAAACAAGAUAAGACA - 95
Stem-loop(if miRNA) --     C       A             AUCAUA        AUAA   U
  UUACA UGUAAAC AGAUAAGACACGU      ACGCGUUU    ACG G
  ||||| ||||||| |||||||||||||      ||||||||    ||| A
  AAUGU ACAUUUG UCUAUUCUGUGCG      UGUGCAGA    UGC U
CA     C       C             ------        --GG   A
Stem-loop sequence UUACACUGUAAACAAGAUAAGACACGUAUCAUAACGCGUUUAUAAACGUGAUACGUGGAGACGUGUGCGUGUCUUAUCUCGUUUACACUGUAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   ACAGAAUAGAACAAAUGUCACAUU   1
  ***|*|||||*|||||||||||||
targets:79   GCACGUAUCUCGUUUACAGUGUAA   102

1.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   ACAGAAUAGAACAAAUGUCACAUU   1
  ***|||||||**||||||||||||
targets:44   AACCUUAUCUCAUUUACAGUGUAA   67

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   ACAGAAUAGAACAAAUGUCACAUU   1
  ||*=||||||**||||||||||||
targets:22   UGGUUUAUCUCAUUUACAGUGUAA   45

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   ACAGAAUAGAACAAAUGUCACAUU   1
  ***|||||||*|||||||*|||||
targets:176   AUACUUAUCUCGUUUACACUGUAA   199

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget