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BaseInfo

ncRNA ID novel_ahy_miR58
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:27559697-27559749 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 30 - AUUAGGGAAAUUGGAGAAGAUGAA - 53
Stem-loop(if miRNA) --     G           -A    AA
  AUUAG GAAAUUGGAGA  GAUG  G
  ||||| |||||||||||  ||||
  UAGUU UUUUGAUUUUU  UUAC  A
UA     A           AA    CA
Stem-loop sequence AUUAGGGAAAUUGGAGAAGAUGAAGAACCAUUAAUUUUUAGUUUUAUUGAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR546810.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  **|*||||||*|||||||||||||
targets:1248   GACUUCUUCUGCAAUUUCCCUAAU   1271

1.0 TSA: Arachis hypogaea Ahy.Unigene6280 mRNA sequence NA coding protein psRNATarget
GAER01040372.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  |||||||||||||||||=||||||
targets:122   UUCAUCUUCUCCAAUUUUCCUAAU   145

1.5 TSA: Arachis hypogaea Unigene40401 mRNA sequence NA coding protein psRNATarget
JR579043.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  |||||||||||||||||=||||||
targets:55   UUCAUCUUCUCCAAUUUUCCUAAU   78

1.5 TSA: Arachis hypogaea Ahy.Unigene44054 mRNA sequence NA coding protein psRNATarget
GAER01049519.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  ||=||||||||=||||||||||||
targets:51   UUUAUCUUCUCUAAUUUCCCUAAU   74

1.5 TSA: Arachis hypogaea Unigene49556 mRNA sequence NA coding protein psRNATarget
EZ749392.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  ||||||||||||||||*|||||||
targets:78   UUCAUCUUCUCCAAUUCCCCUAAU   101

1.5 TSA: Arachis hypogaea CL7323Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01010255.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  ||||||||=||||||||=||||||
targets:52   UUCAUCUUUUCCAAUUUUCCUAAU   75

2.5 TSA: Arachis hypogaea Unigene10262 mRNA sequence NA coding protein psRNATarget
JR557486.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  **=|||||||=|||||||=|||||
targets:410   CAUAUCUUCUUCAAUUUCUCUAAU   433

2.5 TSA: Arachis hypogaea Ahy.Unigene17329 mRNA sequence NA coding protein psRNATarget
GAER01040461.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  **=|||||||=|||||||=|||||
targets:405   CAUAUCUUCUUCAAUUUCUCUAAU   428

2.5 TSA: Arachis hypogaea Unigene40491 mRNA sequence NA coding protein psRNATarget
GAER01004607.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  *|*||=|||||=||||||||||||
targets:257   CUAAUUUUCUCUAAUUUCCCUAAU   280

2.5 TSA: Arachis hypogaea Unigene4610 mRNA sequence NA coding protein psRNATarget
EZ744658.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  *|=|*||||||||||||||=|||*
targets:153   AUUAGCUUCUCCAAUUUCCUUAAA   176

2.5 TSA: Arachis hypogaea CL3008Contig2.Arhy mRNA sequence NA coding protein psRNATarget
GAER01019083.1
ncRNA:24   AAGUAGAAGAGGUUAAAGGGAUUA   1
  **|*||||||*||=||||||||||
targets:1300   AACUUCUUCUGCAGUUUCCCUAAU   1323

2.5 TSA: Arachis hypogaea Unigene19091 mRNA sequence NA coding protein psRNATarget