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BaseInfo

ncRNA ID ath-miRf10322-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UGCUGUCUGGAGAUCGAGCUU - NA
Stem-loop(if miRNA)                   -  AGG           --A    -   CACUUCAUCAACGAAGUGCUCAUAC
GCAAUAAAAAAAGCUCGA CU   AGACAGUAGCC   AGUA GAG                         U
|||||||||||||||||| ||   |||||||||||   |||| |||
CGUUAUUUUUUUCGAGCU GA   UCUGUCGUCGG   UUAG ACU                         C
                  A  -GG           GUU    A   AAUGCAAGUACACUAAUUAAACUCU
Stem-loop sequence GCAAUAAAAAAAGCUCGACUAGGAGACAGUAGCCAAGUAGAGCACUUCAUCAACGAAGUGCUCAUACUCUCUCAAAUUAAUCACAUGAACGUAAUCAAGAUUUUGGGCUGCUGUCUGGAGAUCGAGCUUUUUUUAUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT029491.1
ncRNA:21   UUCGAGCUAGAGGUCUGUCGU   1
  |||*|||||||=|||||||||
targets:373   AAGAUCGAUCUUCAGACAGCA   393

2.5 Arabidopsis thaliana At5g44120 mRNA, complete cds NA coding protein psRNATarget
AY070730.1
ncRNA:21   UUCGAGCUAGAGGUCUGUCGU   1
  |||*|||||||=|||||||||
targets:707   AAGAUCGAUCUUCAGACAGCA   727

2.5 Arabidopsis thaliana AT5g44120/MLN1_4 mRNA, complete cds NA coding protein psRNATarget
NM_180797.1
ncRNA:21   UUCGAGCUAGAGGUCUGUCGU   1
  |||*|||||||=|||||||||
targets:712   AAGAUCGAUCUUCAGACAGCA   732

2.5 Arabidopsis thaliana RmlC-like cupins superfamily protein (CRA1), mRNA RmlC-like cupins superfamily protein(CRA1) coding protein psRNATarget
NM_123779.5
ncRNA:21   UUCGAGCUAGAGGUCUGUCGU   1
  |||*|||||||=|||||||||
targets:775   AAGAUCGAUCUUCAGACAGCA   795

2.5 Arabidopsis thaliana RmlC-like cupins superfamily protein (CRA1), mRNA RmlC-like cupins superfamily protein(CRA1) coding protein psRNATarget
NM_180796.1
ncRNA:21   UUCGAGCUAGAGGUCUGUCGU   1
  |||*|||||||=|||||||||
targets:844   AAGAUCGAUCUUCAGACAGCA   864

2.5 Arabidopsis thaliana RmlC-like cupins superfamily protein (CRA1), mRNA RmlC-like cupins superfamily protein(CRA1) coding protein psRNATarget