ncRNA ID | ath-miRf10322-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCUGUCUGGAGAUCGAGCUU - NA |
Stem-loop(if miRNA) |
                  -  AGG           --A    -   CACUUCAUCAACGAAGUGCUCAUAC GCAAUAAAAAAAGCUCGA CU   AGACAGUAGCC   AGUA GAG                         U |||||||||||||||||| ||   |||||||||||   |||| ||| CGUUAUUUUUUUCGAGCU GA   UCUGUCGUCGG   UUAG ACU                         C                   A  -GG           GUU    A   AAUGCAAGUACACUAAUUAAACUCU |
Stem-loop sequence | GCAAUAAAAAAAGCUCGACUAGGAGACAGUAGCCAAGUAGAGCACUUCAUCAACGAAGUGCUCAUACUCUCUCAAAUUAAUCACAUGAACGUAAUCAAGAUUUUGGGCUGCUGUCUGGAGAUCGAGCUUUUUUUAUUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT029491.1 |
|
2.5 | Arabidopsis thaliana At5g44120 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
AY070730.1 |
|
2.5 | Arabidopsis thaliana AT5g44120/MLN1_4 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_180797.1 |
|
2.5 | Arabidopsis thaliana RmlC-like cupins superfamily protein (CRA1), mRNA | RmlC-like cupins superfamily protein(CRA1) | coding protein | psRNATarget | |||||||||
NM_123779.5 |
|
2.5 | Arabidopsis thaliana RmlC-like cupins superfamily protein (CRA1), mRNA | RmlC-like cupins superfamily protein(CRA1) | coding protein | psRNATarget | |||||||||
NM_180796.1 |
|
2.5 | Arabidopsis thaliana RmlC-like cupins superfamily protein (CRA1), mRNA | RmlC-like cupins superfamily protein(CRA1) | coding protein | psRNATarget |