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BaseInfo

ncRNA ID novel_ahy_miR53
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:81278694-81278893 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 177 - UAACUGAUAGCAUACAUAACACAU - 200
Stem-loop(if miRNA) --   C  A       C    C  A   C    --       U     G            CA     C   CAAAAU       CUAAG  AU    G  UAG
  UAA UG UAGCAUA AUAA AC UAA AUGU  AAUUGAA GUUGA UAAAUAUGUUUA  AAAAU UAU      UUAGUCA     UC  AUUG AA   A
  ||| || ||||||| |||| || ||| ||||  ||||||| ||||| ||||||||||||  ||||| |||      |||||||     ||  |||| ||
  AUU AC AUUGUAU UAUU UG AUU UACA  UUAACUU UAACU GUUUGUACAAAU  UUUUA AUA      AAUCAGU     AG  UAAU UU   A
CA   A  A       A    A  G   A    GA       U     G            AC     A   ------       AAAAA  GU    G  UUU
Stem-loop sequence UAACUGAUAGCAUACAUAACACAUAACAUGUAAUUGAAUGUUGAGUAAAUAUGUUUACAAAAAUCUAUCAAAAUUUAGUCACUAAGUCAUAUUGGAAUAGAAUUUUUGUAAUUGGAAAAAAUGACUAAAUAAAUUUUCAUAAACAUGUUUGGUCAAUUUUCAAUUAGACAUAUUAGGUAUUAUAUAUGUUAACAAUUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   UACACAAUACAUACGAUAGUCAAU   1
  ||||||*|||||||||||||||||
targets:723   AUGUGUCAUGUAUGCUAUCAGUUA   746

1.0 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01049126.1
ncRNA:24   UACACAAUACAUACGAUAGUCAAU   1
  ||-||||*|*||||||||||||||
targets:46   AU-UGUUUUAUAUGCUAUCAGUUA   68

2.0 TSA: Arachis hypogaea Unigene49163 mRNA sequence NA coding protein psRNATarget
EZ735986.1
ncRNA:24   UACACAAUACAUACGAUAGUCAAU   1
  ||-||||*|*||||||||||||||
targets:17   AU-UGUUUUAUAUGCUAUCAGUUA   39

2.0 TSA: Arachis hypogaea CL1Contig15002.Arhy mRNA sequence NA coding protein psRNATarget