ncRNA ID |
novel_ahy_miR50 |
Species |
Arachis hypogaea |
Class |
miRNA |
Genome position |
Aradu.A01:9772256-9772464 [+] |
Reference genome |
Aradu_v1.0 |
Source |
SRR1323745
|
Length |
24 |
Mature sequence(if miRNA) |
1 - AUUAACUGAUAGCAUAUAUGACAC - 24 |
Stem-loop(if miRNA) |
--A    C      C        C  AUAAC    -  -    AUAA             A    CA     C   C  U       --------------CU         U
   UUAA UGAUAG AUAUAUGA AC     AUAU UC AAUU    GUUGACUAAAUAU UUUA  AAAAU UAU AA UUAGUCA                AGAUCAUAU A
   |||| |||||| |||||||| ||     |||| || ||||    ||||||||||||| ||||  ||||| ||| || |||||||                ||||||||| G
   AAUU ACUAUU UAUAUAUU UG     UAUA AG UUAA    UAACUGGUUUAUA GAAU  UUUUA AUA UU AAUCAGU                UUUAGUAUA G
UAC    A      A        A  --AAA    C  A    CCUA             C    AC     A   A  C       AAAAGAGGUUAAUGUU         A
|
Stem-loop sequence |
AUUAACUGAUAGCAUAUAUGACACAUAACAUAUUCAAUUAUAAGUUGACUAAAUAUAUUUACAAAAAUCUAUCAAUUUAGUCACUAGAUCAUAUUAGGAAUAUGAUUUUUGUAAUUGGAGAAAAUGACUAACUUAAUAAAUUUUCAUAAGCAUAUUUGGUCAAUAUCCAAUUAGACAUAUAAAGUAUUAUAUAUAUUAUCAAUUAACAU
|