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BaseInfo

ncRNA ID	ath-miRf10321-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AGCUGGCUCUUCCGGGCGAA - NA
Stem-loop(if miRNA)	UG C  U      C    UG   G   UUCG     -   A   C  UC  C   -   A     ----    A G    G    U AGC  G UC UCUGGG GAGC  GCU AUC    ACGAG CAG CUU UC  GA GAG CUG CUUGU    AUCG U AGCU GCUC U |||  | || |||||| ||||  ||| |||    ||||| ||| ||| ||  || ||| ||| |||||    |||| | |||| |||| UCG  C AG GGGCCU CUCG  CGA UAG    UGUUC GUC GAG AG  CU UUC GAC GAGCA    UAGU G UCGA CGGG C    GU A  C      U    GU   G   -CUA     A   -   C  CU  C   A   -     GUUC    A G    G    U
Stem-loop sequence	AGCUGGCUCUUCUGGGCGAGCUGGCUGAUCUUCGACGAGCAGACUUCUCUCGACGAGCUGACUUGUAUCGAUGAGCUGGCUCUUCUGGGCGAGCUGGAUGAUCUUGACGAGCAGACUUCUCUCGACGAGCUGACUUGUAUCGAUGAGCUGGCUCUUCCGGGCGAACUGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK228976.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   |||||||||||||||||||| targets:58   UUCGCCCGGAAGAGCCAGCU   77 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL16-28-F17	NA	coding protein	psRNATarget
AK228976.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   *||||||*|||||||||||| targets:130   CUCGCCCAGAAGAGCCAGCU   149 Target Full Sequence	1.5	Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL16-28-F17	NA	coding protein	psRNATarget
AK228976.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   *||||||*|||||||||||| targets:203   CUCGCCCAGAAGAGCCAGCU   222 Target Full Sequence	1.5	Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL16-28-F17	NA	coding protein	psRNATarget
NM_121546.2	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   |||||||*|||||||||||| targets:109   UUCGCCCAGAAGAGCCAGCU   128 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT5G15420)	coding protein	psRNATarget
NM_121546.2	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   *||||||*|||||||||||| targets:254   CUCGCCCAGAAGAGCCAGCU   273 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT5G15420)	coding protein	psRNATarget
BT006557.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||=| targets:317   UUCGCCAGGAAGAGCCAGUU   336 Target Full Sequence	2.5	Arabidopsis thaliana At4g27156 gene, complete cds	NA	coding protein	psRNATarget
AY117157.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||=| targets:296   UUCGCCAGGAAGAGCCAGUU   315 Target Full Sequence	2.5	Arabidopsis thaliana putative NWMU3 - 2S albumin 3 precursor protein (At4g27160) mRNA, complete cds	NA	coding protein	psRNATarget
AK318742.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||=| targets:372   UUCGCCAGGAAGAGCCAGUU   391 Target Full Sequence	2.5	Arabidopsis thaliana AT4G27150 mRNA, complete cds, clone: RAFL15-14-D09	NA	coding protein	psRNATarget
BX826477.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||=| targets:353   UUCGCCAGGAAGAGCCAGUU   372 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY080779.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||=| targets:336   UUCGCCAGGAAGAGCCAGUU   355 Target Full Sequence	2.5	Arabidopsis thaliana putative NWMU3 - 2S albumin 3 precursor protein (At4g27160) mRNA, complete cds	NA	coding protein	psRNATarget
BT002073.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||=| targets:368   UUCGCCAGGAAGAGCCAGUU   387 Target Full Sequence	2.5	Arabidopsis thaliana NWMU2 - 2S albumin 2 precursor (At4g27150) mRNA, complete cds	NA	coding protein	psRNATarget
NM_118849.2	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||=| targets:372   UUCGCCAGGAAGAGCCAGUU   391 Target Full Sequence	2.5	Arabidopsis thaliana seed storage albumin 2 (SESA2), mRNA	seed storage albumin 2(SESA2)	coding protein	psRNATarget
NM_118850.3	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||=| targets:336   UUCGCCAGGAAGAGCCAGUU   355 Target Full Sequence	2.5	Arabidopsis thaliana seed storage albumin 3 (SESA3), mRNA	seed storage albumin 3(SESA3)	coding protein	psRNATarget
AY072508.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||*| targets:302   UUCGCCAGGAAGAGCCAGAU   321 Target Full Sequence	2.5	Arabidopsis thaliana NWMU1-2S albumin 1 precursor (At4g27140; T24A18.90) mRNA, complete cds	NA	coding protein	psRNATarget
NM_118848.2	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||*| targets:336   UUCGCCAGGAAGAGCCAGAU   355 Target Full Sequence	2.5	Arabidopsis thaliana seed storage albumin 1 (SESA1), mRNA	seed storage albumin 1(SESA1)	coding protein	psRNATarget
AF370541.1	ncRNA:20   AAGCGGGCCUUCUCGGUCGA   1   ||||||*|||||||||||*| targets:336   UUCGCCAGGAAGAGCCAGAU   355 Target Full Sequence	2.5	Arabidopsis thaliana NWMU1-2S albumin 1 precursor (T24A18.90) mRNA, complete cds	NA	coding protein	psRNATarget