Search result

BaseInfo

ncRNA ID novel_ahy_miR40
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:122983842-122983936 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 75 - AACCCUCAAAGGCUUCCAUUC - 95
Stem-loop(if miRNA) --A    UC          A     UG        -------A     UUAU
   ACCC  AAAGGCUUCC UUCUU  UAUGUUCA        UUCCA    U
   ||||  |||||||||| |||||  ||||||||        |||||
   UGGG  UUUCCGAAGG AAGAA  AUACAAGU        AAGGU    C
UGC    UU          G     --        AAAAAAGA     UUAA
Stem-loop sequence AACCCUCAAAGGCUUCCAUUCUUUGUAUGUUCAAUUCCAUUAUUCAAUUUGGAAAGAAAAAAUGAACAUAAAGAAGGGAAGCCUUUUUGGGUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ721288.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:546   UGAUGGGAGCCGUUGAGGGUU   566

2.5 TSA: Arachis hypogaea CL1Contig304.Arhy mRNA sequence NA coding protein psRNATarget
EZ723829.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:554   UGAUGGGAGCCGUUGAGGGUU   574

2.5 TSA: Arachis hypogaea CL1Contig2845.Arhy mRNA sequence NA coding protein psRNATarget
GAER01035568.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:1181   UGAUGGGAGCCGUUGAGGGUU   1201

2.5 TSA: Arachis hypogaea Unigene35591 mRNA sequence NA coding protein psRNATarget