ncRNA ID | novel_ahy_miR38 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A04:122127859-122127966 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 85 - CGAUUAAGAAUGGAUUGGUUCGGU - 108 |
Stem-loop(if miRNA) |
--U         G A  A              -       AC       UAUAU    GAAUCAAUU A UU UAAUUGGUUUGGUU GGUUCGA  UUAUAUA     A    ||||||||| | || |||||||||||||| |||||||  |||||||     U    CUUGGUUAG U AG AUUAGCUAAAUCAA CCAAGCU  GGUAUGU     A UGG         G A  A              A       CA       UUUUU |
Stem-loop sequence | UGAAUCAAUUGAAUUAUAAUUGGUUUGGUUGGUUCGAACUUAUAUAUAUAUAUAUUUUUUGUAUGGACUCGAACCAAACUAAAUCGAUUAAGAAUGGAUUGGUUCGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01049632.1 |
|
1.5 | TSA: Arachis hypogaea Unigene49669 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ743619.1 |
|
1.5 | TSA: Arachis hypogaea CL19742Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |