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BaseInfo

ncRNA ID novel_ahy_miR38
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:122127859-122127966 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 85 - CGAUUAAGAAUGGAUUGGUUCGGU - 108
Stem-loop(if miRNA) --U         G A  A              -       AC       UAUAU
   GAAUCAAUU A UU UAAUUGGUUUGGUU GGUUCGA  UUAUAUA     A
   ||||||||| | || |||||||||||||| |||||||  |||||||     U
   CUUGGUUAG U AG AUUAGCUAAAUCAA CCAAGCU  GGUAUGU     A
UGG         G A  A              A       CA       UUUUU
Stem-loop sequence UGAAUCAAUUGAAUUAUAAUUGGUUUGGUUGGUUCGAACUUAUAUAUAUAUAUAUUUUUUGUAUGGACUCGAACCAAACUAAAUCGAUUAAGAAUGGAUUGGUUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01049632.1
ncRNA:24   UGGCUUGGUUAGGUAAGAAUUAGC   1
  |||||||||||||=||||||||||
targets:185   ACCGAACCAAUCCGUUCUUAAUCG   208

1.5 TSA: Arachis hypogaea Unigene49669 mRNA sequence NA coding protein psRNATarget
EZ743619.1
ncRNA:24   UGGCUUGGUUAGGUAAGAAUUAGC   1
  |||*|||||||||=||||||||||
targets:391   ACCAAACCAAUCCGUUCUUAAUCG   414

1.5 TSA: Arachis hypogaea CL19742Contig1.Arhy mRNA sequence NA coding protein psRNATarget