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BaseInfo

ncRNA ID novel_ahy_miR31
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:107775574-107775761 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AAUCGAUUGAAUUUUGCAAGGCAU - 24
Stem-loop(if miRNA) --                            -            ---------  AUCGAUUGAUUUUUAUCAUACAAUCGAAUGAAUCGAAUGAAUUGU
  AAUCGAUUGAAUUUUGCAAGGCAUGUGA UUUUUUCUAAUU         CA                                             G
  |||||||||||||||||||||||||||| ||||||||||||         ||
  UUAGUUAACUUAAAACGUUCUGUACACU AAAAAAGAUUAA         CA                                             A
UG                            U            AUUAAAUAA  AGGAUGAUAGGUUAGCUAACUUAAGUAGUUUUCGUUGUACUUAAA
Stem-loop sequence AAUCGAUUGAAUUUUGCAAGGCAUGUGAUUUUUUCUAAUUCAAUCGAUUGAUUUUUAUCAUACAAUCGAAUGAAUCGAAUGAAUUGUGAAAAUUCAUGUUGCUUUUGAUGAAUUCAAUCGAUUGGAUAGUAGGAACAAUAAAUUAAAUUAGAAAAAAUUCACAUGUCUUGCAAAAUUCAAUUGAUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000335.1
ncRNA:24   UACG--GAACGUUUUAAGUUAGCUAA   1
  *|||--=|||||||||||||||*||*
targets:35   UUGCAAUUUGCAAAAUUCAAUCUAUA   60

2.5 TSA: Arachis hypogaea Unigene335 mRNA sequence NA coding protein psRNATarget