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BaseInfo

ncRNA ID novel_ahy_miR22
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:29320202-29320415 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AUAUUAACUGAUAGCAUACAUGAC - 24
Stem-loop(if miRNA) --       C          C    C    A C    UC    A  CG     A     A A   C          C      G   CUAGG  A      G   UA
  AUAUUAA UGAUAGCAUA AUGA AUAU A AUGU  AAUU GA  UUGAC AAAUA G UUA GAAAAUUUAU AAUUUA UCA     UC UAAUUA AAA  U
  ||||||| |||||||||| |||| |||| | ||||  |||| ||  ||||| ||||| | ||| |||||||||| |||||| |||     || |||||| |||  A
  UGUAAUU ACUAUUGUAU UAUU UAUA U UACA  UUAA CU  AACUG UUUAU C AAU CUUUUAAAUA UUAAAU AGU     AG AUUAAU UUU  A
UU       A          A    U    C A    GA    C  AU     G     A A   A          A      A   AAAAA  -      G   UU
Stem-loop sequence AUAUUAACUGAUAGCAUACAUGACAUAUAACAUGUUCAAUUAGACGUUGACAAAAUAAGAUUACGAAAAUUUAUCAAUUUAGUCACUAGGUCAUAAUUAGAAAUAUAAUUUUUGUAAUUAGAAAAAAUGAAUAAAUUAAUAAAUUUUCAUAAACAUAUUUGGUCAAUAUCCAAUUAGACAUAUCAUAUUUUAUAUAUGUUAUCAAUUAAUGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   CAGUACAUACGAUAGUCAAUUAUA   1
  ||||||||||||||||||||||||
targets:727   GUCAUGUAUGCUAUCAGUUAAUAU   750

0.0 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget