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BaseInfo

ncRNA ID	ath-miRf10318-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UAGAAGGGAGUGAGUUCUCG - NA
Stem-loop(if miRNA)	U           AAA          --  AA  AA    ----AACAACCAA   GCCCAUACC UAGCU UUGAGAACUCA   CCUUCUACUU  UG  GA  AUAU             UAU         A ||||| |||||||||||   ||||||||||  ||  ||  ||||             |||         A AUUGA AGCUCUUGAGU   GGAAGAUGAA  AC  CU  UGUA             CGA         G      U           GAG          CA  AG  GG    ACAAUUAAACUAA   AUCUCAUCG
Stem-loop sequence	UAGCUUUUGAGAACUCAAAACCUUCUACUUUGAAGAAAAUAUAACAACCAAUAUGCCCAUACCAAGGCUACUCUAAGCAAUCAAAUUAACAAUGUGGUCGACAACAAGUAGAAGGGAGUGAGUUCUCGAUAGUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY091030.1	ncRNA:20   GCUCUUGAGUGAGGGAAGAU   1   ||||||=|||||||=||||| targets:1037   CGAGAAUUCACUCCUUUCUA   1056 Target Full Sequence	2.5	Arabidopsis thaliana putative ATPase (ISW2) (At3g06400) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001202897.1	ncRNA:20   GCUCUUGAGUGAGGGAAGAU   1   ||||||=|||||||=||||| targets:1065   CGAGAAUUCACUCCUUUCUA   1084 Target Full Sequence	2.5	Arabidopsis thaliana chromatin-remodeling protein 11 (CHR11), mRNA	chromatin-remodeling protein 11(CHR11)	coding protein	psRNATarget
NM_111515.5	ncRNA:20   GCUCUUGAGUGAGGGAAGAU   1   ||||||=|||||||=||||| targets:1131   CGAGAAUUCACUCCUUUCUA   1150 Target Full Sequence	2.5	Arabidopsis thaliana chromatin-remodeling protein 11 (CHR11), mRNA	chromatin-remodeling protein 11(CHR11)	coding protein	psRNATarget
NM_001202898.2	ncRNA:20   GCUCUUGAGUGAGGGAAGAU   1   ||||||=|||||||=||||| targets:1131   CGAGAAUUCACUCCUUUCUA   1150 Target Full Sequence	2.5	Arabidopsis thaliana chromatin-remodeling protein 11 (CHR11), mRNA	chromatin-remodeling protein 11(CHR11)	coding protein	psRNATarget
BX813527.1	ncRNA:20   GCUCUUGAGUGAGGGAAGAU   1   |*|||||||||||*|||||| targets:1247   CAAGAACUCACUCACUUCUA   1266 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget