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BaseInfo

ncRNA ID novel_ahy_miR15
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:19410328-19410441 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 91 - AACAAAAAGGAGAAGAUGAACAAG - 114
Stem-loop(if miRNA) AACA            U   -    A      G        C     -     G  U
    AAAAGGAGAAGA GAA CAAG AAAGAA AAGAAGUA AUGAU GAGGA UU U
    |||||||||||| ||| |||| |||||| |||||||| ||||| ||||| || G
    UUUUUCUCUUCU UUU GUUU UUUUUU UUCUUUGU UAUUA UUUUU AG A
CUUC            U   A    G      A        -     A     G  G
Stem-loop sequence AACAAAAAGGAGAAGAUGAACAAGAAAAGAAGAAGAAGUACAUGAUGAGGAGUUUUGAGGAGUUUUUAAUUAUUGUUUCUUAUUUUUUGUUUGAUUUUUCUUCUCUUUUUCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01028517.1
ncRNA:24   GAACAAGUAGAAGAGGAAAAACAA   1
  =****||||=||||||||||||||
targets:1339   UAACCUCAUUUUCUCCUUUUUGUU   1362

1.0 TSA: Arachis hypogaea Unigene28535 mRNA sequence NA coding protein psRNATarget
GAER01023254.1
ncRNA:24   GAACAAGUAGAAGAGGAAAAACAA   1
  =|||*|||||||||||*|||||||
targets:134   UUUGAUCAUCUUCUCCAUUUUGUU   157

1.5 TSA: Arachis hypogaea Unigene23265 mRNA sequence NA coding protein psRNATarget
GAER01032152.1
ncRNA:24   GAACAAGUAGAAGAGGAAAAACAA   1
  *|||**=|||||||||||||||||
targets:409   AUUGAAUAUCUUCUCCUUUUUGUU   432

2.0 TSA: Arachis hypogaea Unigene32174 mRNA sequence NA coding protein psRNATarget
GAER01030299.1
ncRNA:24   GAACAAGUAGAAGAGGAAAAACAA   1
  |||-|||||=|||||||||||*||
targets:85   CUU-UUCAUUUUCUCCUUUUUCUU   107

2.5 TSA: Arachis hypogaea Unigene30319 mRNA sequence NA coding protein psRNATarget
GAER01036787.1
ncRNA:24   GAACAAGUAGAAGAGGAAAAACAA   1
  |||*|||*||||||||||*|||||
targets:11   CUUCUUCUUCUUCUCCUUCUUGUU   34

2.5 TSA: Arachis hypogaea Unigene36811 mRNA sequence NA coding protein psRNATarget
GU457418.1
ncRNA:24   GAACAAGUAGAAGAGGAAAAACAA   1
  *||-|||*|||||||=||||||||
targets:32   AUU-UUCCUCUUCUCUUUUUUGUU   54

2.5 Arachis hypogaea germin-like protein subfamily 2 member 1 precursor (GLP2) mRNA, complete cds NA coding protein psRNATarget
EU024476.1
ncRNA:24   GAACAAGUAGAAGAGGAAAAACAA   1
  *||-|||*|||||||=||||||||
targets:11   AUU-UUCCUCUUCUCUUUUUUGUU   33

2.5 Arachis hypogaea oxalate oxidase (OxOxl) mRNA, complete cds NA coding protein psRNATarget
GAER01044490.1
ncRNA:24   GAACAAGUAGAAGAGGAAAAACAA   1
  |||-||=*|=||||||||||||||
targets:90   CUU-UUUUUUUUCUCCUUUUUGUU   112

3.0 TSA: Arachis hypogaea Unigene44524 mRNA sequence NA coding protein psRNATarget