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BaseInfo

ncRNA ID novel_ahy_miR1
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A09:7332510-7332662 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - UAGGACACAAAUACAGAGAUG - 21
Stem-loop(if miRNA) UAG    C                   AAAAU      --      G GGA   GGAGAUA  AAUAUACAACAAUCUG
   GACA AAAUACAGAGAUGGAGAGA     AAGAAA  UUGUGU U   GCU       UG                U
   |||| |||||||||||||||||||     ||||||  |||||| |   |||       ||                C
   CUGU UUUAUGUCUCUACCUCUCU     UUCUUU  AGCAUA G   CGA       UG                A
GCA    U                   ---CU      UA      G GAA   ---GAGA  GAAAGUUGUUUUUUUA
Stem-loop sequence UAGGACACAAAUACAGAGAUGGAGAGAAAAAUAAGAAAUUGUGUGUGGAGCUGGAGAUAUGAAUAUACAACAAUCUGUCAAUUUUUUUGUUGAAAGGUAGAGAGCAAGGGAUACGAAUUUUCUUUCUCUCUCCAUCUCUGUAUUUUUGUCACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GF100552.1
ncRNA:21   GUAGAGACAUAAACACAGGAU   1
  =||||*||||||||||||||*
targets:803   UAUCUAUGUAUUUGUGUCCUC   823

2.0 GS145 Peanut Unigenes Arachis hypogaea STS cDNA clone 2_7666, sequence tagged site NA coding protein psRNATarget
EZ738408.1
ncRNA:21   GUAGAGACAUAAACACAGGAU   1
  =||||*||||||||||||||*
targets:803   UAUCUAUGUAUUUGUGUCCUC   823

2.0 TSA: Arachis hypogaea CL10390Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01037289.1
ncRNA:21   GUAGAGACAUAAACACAGGAU   1
  =||||*||||||||||||||*
targets:421   UAUCUAUGUAUUUGUGUCCUC   441

2.0 TSA: Arachis hypogaea Unigene37313 mRNA sequence NA coding protein psRNATarget
GAER01043182.1
ncRNA:21   GUAGAGACAUAAACACAGGAU   1
  =||||||||||||||*||||*
targets:572   UAUCUCUGUAUUUGUAUCCUU   592

2.5 TSA: Arachis hypogaea Unigene43215 mRNA sequence NA coding protein psRNATarget
JR574568.1
ncRNA:21   GUAGAGACAUAAACACAGGAU   1
  =||*|||||||||*|||||||
targets:82   UAUAUCUGUAUUUUUGUCCUA   102

2.5 TSA: Arachis hypogaea Ahy.Unigene37605 mRNA sequence NA coding protein psRNATarget
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