ncRNA ID | ath-miRf10315-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - ACCUUUAUAUCCGCAUUUGCG - NA |
Stem-loop(if miRNA) |
  A                     C  U   A    G   AA   ACCAAUA  GGU    AGCGAAA   AC GA AUGAUGCGCAAAUGCGGAUAU AA GUA AUCA GAC  CAA       GA   GCUC       ACA  A || ||||||||||||||||||||| || ||| |||| |||  |||       ||   ||||       ||| CU UACUACGCGUUUACGCCUAUA UU CAU UAGU CUG  GUU       CU   UGGG       UGU  A   C                     U  C   A    A   GG   ACAAAGA  AUU    --AAAAG   AA |
Stem-loop sequence | GAAAUGAUGCGCAAAUGCGGAUAUCAAUGUAAAUCAGGACAACAAACCAAUAGAGGUGCUCAGCGAAAACAACAAAAUGUGAAAAGGGUUUAUCAGAAACAUUGGGGUCAUGAUAUACCUUUAUAUCCGCAUUUGCGCAUCAUCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001337874.1 |
|
2.5 | Arabidopsis thaliana protein FLOWERING locus D-like protein (FLD), partial mRNA | protein FLOWERING locus D-like protein(FLD) | coding protein | psRNATarget | |||||||||
NM_111874.4 |
|
2.5 | Arabidopsis thaliana protein FLOWERING locus D-like protein (FLD), partial mRNA | protein FLOWERING locus D-like protein(FLD) | coding protein | psRNATarget | |||||||||
NM_001337873.1 |
|
2.5 | Arabidopsis thaliana protein FLOWERING locus D-like protein (FLD), mRNA | protein FLOWERING locus D-like protein(FLD) | coding protein | psRNATarget | |||||||||
NM_001337872.1 |
|
2.5 | Arabidopsis thaliana protein FLOWERING locus D-like protein (FLD), mRNA | protein FLOWERING locus D-like protein(FLD) | coding protein | psRNATarget |