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BaseInfo

ncRNA ID ahy-miR160-5p
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGCCUGGCUCCCUGAAUGCCA - NA
Stem-loop(if miRNA) -AAAUA      -UUAUG       C         GA            UUA         GA
      UUCGAA      UGUCUGC UGGCUCCCU  AUGCCAUGUAAG   GUUUGUUAA  A
      ||||||      ||||||| |||||||||  ||||||||||||   |||||||||  A
      AAGUUU      GCGGACG ACUGAGGGA  UACGGUAUAUUC   CAAACAAUU  A
UAUACA      UACUUA       C         AG            -UG         AG
Stem-loop sequence AAAUAUUCGAAUUAUGUGUCUGCCUGGCUCCCUGAAUGCCAUGUAAGUUAGUUUGUUAAGAAAAGAUUAACAAACGUCUUAUAUGGCAUGAAGGGAGUCACGCAGGCGAUUCAUUUUGAAACAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR572128.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  ||||||*||||||||||||||
targets:7   UGGCAUGCAGGGAGCCAGGCA   27

1.0 TSA: Arachis hypogaea Ahy.Unigene34110 mRNA sequence NA coding protein psRNATarget
GAER01016175.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  ||||||*||||||||||||||
targets:125   UGGCAUACAGGGAGCCAGGCA   145

1.0 TSA: Arachis hypogaea Unigene16183 mRNA sequence NA coding protein psRNATarget
EZ743327.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  ||||||*||||||||||||||
targets:357   UGGCAUACAGGGAGCCAGGCA   377

1.0 TSA: Arachis hypogaea CL17615Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ737124.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  *|||||*||||||||||||||
targets:176   AGGCAUACAGGGAGCCAGGCA   196

1.0 TSA: Arachis hypogaea CL3479Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01021725.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  *|||||*||||||||||||||
targets:406   AGGCAUACAGGGAGCCAGGCA   426

1.0 TSA: Arachis hypogaea Unigene21736 mRNA sequence NA coding protein psRNATarget
GAER01045901.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  *|||||*||||||||||||||
targets:363   AGGCAUACAGGGAGCCAGGCA   383

1.0 TSA: Arachis hypogaea Unigene45936 mRNA sequence NA coding protein psRNATarget
JR541930.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  *|||||*||||||||||||||
targets:322   AGGCAUACAGGGAGCCAGGCA   342

1.0 TSA: Arachis hypogaea Ahy.Unigene1258 mRNA sequence NA coding protein psRNATarget
GAER01021728.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  *|||||*||||||||||||||
targets:751   AGGCAUACAGGGAGCCAGGCA   771

1.0 TSA: Arachis hypogaea Unigene21739 mRNA sequence NA coding protein psRNATarget
JR553429.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  *|||||*||||||||||||||
targets:654   AGGCAUACAGGGAGCCAGGCA   674

1.0 TSA: Arachis hypogaea Ahy.Unigene13162 mRNA sequence NA coding protein psRNATarget
GAER01021729.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  *|||||*||||||||||||||
targets:194   AGGCAUACAGGGAGCCAGGCA   214

1.0 TSA: Arachis hypogaea Unigene21740 mRNA sequence NA coding protein psRNATarget
GAER01021723.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  **||||*||||||*|||||||
targets:406   AAGCAUACAGGGAACCAGGCA   426

2.5 TSA: Arachis hypogaea Unigene21734 mRNA sequence NA coding protein psRNATarget
GAER01021726.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  **||||*||||||*|||||||
targets:738   AAGCAUACAGGGAACCAGGCA   758

2.5 TSA: Arachis hypogaea Unigene21737 mRNA sequence NA coding protein psRNATarget
GAER01021724.1
ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1
  **||||*||||||*|||||||
targets:647   AAGCAUACAGGGAACCAGGCA   667

2.5 TSA: Arachis hypogaea Unigene21735 mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).