| ncRNA ID | zma-miR169r-3p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr9:109138534-109138659 [-] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 2 - GGCAAGUUGUCCUUGGCUACA - 22 |
| Stem-loop(if miRNA) |
-- C UG UAUUUU A - U CAG AG --UA G U G AGCCAAGGA ACUUGCCGGG G GCAU GCAUG UA GGG CA U CAA C | ||||||||| |||||||||| | |||| ||||| || ||| || | ||| U C UCGGUUCCU UGAACGGCCU C CGUG CGUGC AU CCC GU A GUU G UA A GU -UCUGU - G C --A GA UUUA G U |
| Stem-loop sequence | GCAGCCAAGGAUGACUUGCCGGGUAUUUUGAGCAUGCAUGUUACAGGGGAGCAUAUGCAAUCUGUUUGGAAUUUUGAGCCCAUACCGUGCGGUGCCUGUCUUCCGGCAAGUUGUCCUUGGCUACAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020548143.1 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC103648407 (LOC103648407), mRNA | NA | coding protein | psRNATarget | |||||||||
| BT060668.2 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0031E01 mRNA, complete cds | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |