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BaseInfo

ncRNA ID zma-miR171n-5p
Species Zea mays
Class miRNA
Genome position chr9:96668331-96668408 [-]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 57 - UAUUGGUGAGGUUCAAUCCGA - 77
Stem-loop(if miRNA) --         A         C      A         A
  AUAUUGGUG GGUUCAAUC GAUGUU GGUUUUACA A
  ||||||||| ||||||||| |||||| ||||||||| A
  UAUAACCGC CCGAGUUAG CUAUGA CUAAAAUGU G
UC         G         U      -         C
Stem-loop sequence AUAUUGGUGAGGUUCAAUCCGAUGUUAGGUUUUACAAAAGCUGUAAAAUCAGUAUCUGAUUGAGCCGCGCCAAUAUCU

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).