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BaseInfo

ncRNA ID zma-miR319c-5p
Species Zea mays
Class miRNA
Genome position chr8:148277363-148277578 [-]
Reference genome RefGen_v2
Source miRBase
Length 20
Mature sequence(if miRNA) 175 - GAGCUCUCUUCAGUCCACUC - 194
Stem-loop(if miRNA) --G    AU   UUCUGUG    A    U            CU UA       U         --CA      G   AC          AC         A   U  G AAG
   GUUU  GGC       GAAG GAGC CUCUUCAGUCCA  C  AAAUGGC GUAGGGUUU    UUAGCU CCG  UCAUCCAUUC  CUGCCAAGA CCA GG C   C
   ||||  |||       |||| |||| ||||||||||||  |  ||||||| |||||||||    |||||| |||  ||||||||||  ||||||||| ||| || |
   CAAA  CCG       CUUC CUCG GGGAAGUCAGGU  G  UUUGUCG CAUCUCAAA    AAUCGA GGC  GGUGGGUGAG  GAUGGUUCU GGU CU G   G
UCA    -C   --UUUAA    C    U            UG CA       -         CUAA      G   GC          CC         -   -  G AUG
Stem-loop sequence GGUUUAUGGCUUCUGUGGAAGAGAGCUCUCUUCAGUCCACUCUAAAAUGGCUGUAGGGUUUCAUUAGCUGCCGACUCAUCCAUUCACCUGCCAAGAACCAUGGGCAAGCGGUAGGUCUGGUCUUGGUAGCCGAGUGGGUGGCGCGGGAGCUAAAAUCAAACUCUACGCUGUUUACGGUUGGACUGAAGGGUGCUCCCUUCAAUUUGCCCAAACACU

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).