| ncRNA ID | zma-miR408b-3p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr8:38488497-38488643 [-] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 3 - CUGCACUGCCUCUUCCCUGGC - 23 |
| Stem-loop(if miRNA) |
--GA C A U U CAU ---------A U CAAAUUUGAUUUCUGUUUGCUC CAGGGA GAGGCAG GCA GGG AGGGGGC CAAC GAA UC G |||||| ||||||| ||| ||| ||||||| |||| ||| || C GUCCCU CUCCGUC CGU CCC UCCCUCG GUUG CAA AC U CUCG U A C - -UU CGGACUCACA - ACCACUCAGGGAGGUAAAACAC |
| Stem-loop sequence | GACAGGGACGAGGCAGAGCAUGGGUAGGGGGCCAUCAACAGAAUUCCAAAUUUGAUUUCUGUUUGCUCGCUCACAAAAUGGAGGGACUCACCACAAACACACUCAGGCGUUGUUGCUCCCUCCCCUGCACUGCCUCUUCCCUGGCUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008661217.2 |
|
3.0 | PREDICTED: Zea mays basic blue protein (LOC103638234), mRNA | NA | coding protein | psRNATarget | |||||||||
| EU941616.1 |
|
2.5 | Zea mays clone 1468071 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| DQ244152.1 |
|
2.0 | Zea mays clone 2594 mRNA sequence | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |