ncRNA ID | ath-miRf10312-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - UCCUGCUAAUGGUUCUAGCAGAA - NA |
Stem-loop(if miRNA) |
                             A   A  ---AA  -  AUACAGCUUAUACUCAGAUAACAAUCUUAUCAAGA AAAGUUUCUGCUAGAACCAUUAGCAGGAA AUC CG     GA GC                                   U ||||||||||||||||||||||||||||| ||| ||     || || UUUCAAAGACGAUCUUGGUAAUCGUCCUU UAG GC     CU UA                                   A                              C   -  AAACA  A  GAUCUCUAAAGACUACCGAUACUCUGUAAACAUAG |
Stem-loop sequence | AAAGUUUCUGCUAGAACCAUUAGCAGGAAAAUCACGAAGAGCAUACAGCUUAUACUCAGAUAACAAUCUUAUCAAGAUAGAUACAAAUGUCUCAUAGCCAUCAGAAAUCUCUAGAUAUCACAAACGGAUCUUCCUGCUAAUGGUUCUAGCAGAAACUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY094006.1 |
|
1.5 | Arabidopsis thaliana At1g71810/F14O23_17 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
AY039896.1 |
|
1.5 | Arabidopsis thaliana At1g71810/F14O23_17 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT000801.1 |
|
1.5 | Arabidopsis thaliana At1g71810 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY081264.1 |
|
1.5 | Arabidopsis thaliana unknown protein (At1g71810) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_105839.3 |
|
1.5 | Arabidopsis thaliana Protein kinase superfamily protein mRNA | Protein kinase superfamily protein(AT1G71810) | coding protein | psRNATarget |