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BaseInfo

ncRNA ID	ath-miRf10311-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - ACCGCCGCCGUGUUCUGUCGA - NA
Stem-loop(if miRNA)	-GGCG                 C  UC   --UG  G      GAUGGGGCGCGGCGGCG GU  CUG    AC C      ||||||||||||||||| ||  |||    ||      CUGUCUUGUGCCGCCGC CA  GAC    UG U UUGAG                 -  UU   UAAA  U
Stem-loop sequence	GGCGGAUGGGGCGCGGCGGCGCGUUCCUGUGACGCUUGUAAAUCAGUUACCGCCGCCGUGUUCUGUCGAGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_112122.4	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |*||||||||||||*|||||| targets:183   UGGACAGAACACGGAGGCGGU   203 Target Full Sequence	1.5	Arabidopsis thaliana NOP56-like pre RNA processing ribonucleoprotein mRNA	NOP56-like pre RNA processing ribonucleoprotein(AT3G12860)	coding protein	psRNATarget
AK226630.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |*||||||||||||*|||||| targets:189   UGGACAGAACACGGAGGCGGU   209 Target Full Sequence	1.5	Arabidopsis thaliana mRNA for putative nucleolar protein, partial cds, clone: RAFL07-33-P13	NA	coding protein	psRNATarget
NM_115121.5	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |||=|*||||||||||||||| targets:538   UCGGCUGAACACGGCGGCGGU   558 Target Full Sequence	2.0	Arabidopsis thaliana GATA zinc finger protein mRNA	GATA zinc finger protein(AT3G52610)	coding protein	psRNATarget
AY034915.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |||=|*||||||||||||||| targets:529   UCGGCUGAACACGGCGGCGGU   549 Target Full Sequence	2.0	Arabidopsis thaliana unknown protein (At3g52610) mRNA, complete cds	NA	coding protein	psRNATarget
BX824045.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |||=|*||||||||||||||| targets:503   UCGGCUGAACACGGCGGCGGU   523 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH18ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX824594.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |||=|*||||||||||||||| targets:538   UCGGCUGAACACGGCGGCGGU   558 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX822475.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |||=|*||||||||||||||| targets:495   UCGGCUGAACACGGCGGCGGU   515 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX824777.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |||=|*||||||||||||||| targets:499   UCGGCUGAACACGGCGGCGGU   519 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX823232.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |||=|*||||||||||||||| targets:451   UCGGCUGAACACGGCGGCGGU   471 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY142492.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   |||=|*||||||||||||||| targets:471   UCGGCUGAACACGGCGGCGGU   491 Target Full Sequence	2.0	Arabidopsis thaliana unknown protein (At3g52610) mRNA, complete cds	NA	coding protein	psRNATarget
NM_114784.3	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   *||=||||||||||=|||||| targets:3910   GCGGCAGAACACGGUGGCGGU   3930 Target Full Sequence	2.5	Arabidopsis thaliana defective in meristem silencing 3 (DMS3), mRNA	defective in meristem silencing 3(DMS3)	coding protein	psRNATarget
NM_124976.4	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   *|||||*||*||||||||||| targets:268   GCGACACAAGACGGCGGCGGU   288 Target Full Sequence	2.5	Arabidopsis thaliana Uncharacterized protein family (UPF0172) (emb2731), mRNA	Uncharacterized protein family (UPF0172)(emb2731)	coding protein	psRNATarget
AK226469.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   *|||||*||*||||||||||| targets:233   GCGACACAAGACGGCGGCGGU   253 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL06-67-P20	NA	coding protein	psRNATarget
AY087233.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   *|||||*||*||||||||||| targets:164   GCGACACAAGACGGCGGCGGU   184 Target Full Sequence	2.5	Arabidopsis thaliana clone 33108 mRNA, complete sequence	NA	coding protein	psRNATarget
AY072016.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   *|||||*||*||||||||||| targets:133   GCGACACAAGACGGCGGCGGU   153 Target Full Sequence	2.5	Arabidopsis thaliana AT5g55940/MYN21_5 mRNA, complete cds	NA	coding protein	psRNATarget
AY122887.1	ncRNA:21   AGCUGUCUUGUGCCGCCGCCA   1   *|||||*||*||||||||||| targets:78   GCGACACAAGACGGCGGCGGU   98 Target Full Sequence	2.5	Arabidopsis thaliana AT5g55940/MYN21_5 mRNA, complete cds	NA	coding protein	psRNATarget