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BaseInfo

ncRNA ID zma-miR169b-3p
Species Zea mays
Class miRNA
Genome position chr8:4791975-4792130 [+]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 118 - GGCAAGUUGUUCUUGGCUACA - 138
Stem-loop(if miRNA)     CU    GA        C         UG          --CUAU     A  AACGAGCGACGCCUCUGAUGUC
UAGG  CGGG  CUACGGUG AGCCAAGGA  ACUUGCCGAU      CGUCG UC                      U
||||  ||||  |||||||| |||||||||  ||||||||||      ||||| ||
GUCC  GUCC  GGUGCCAC UCGGUUCUU  UGAACGGCUA      ACUAC AG                      G
    UC    UC        A         GU          UCUACU     C  ACUGCUGCUAUCUACAGCUCUA
Stem-loop sequence UAGGCUCGGGGACUACGGUGCAGCCAAGGAUGACUUGCCGAUCUAUCGUCGAUCAACGAGCGACGCCUCUGAUGUCUGAUCUCGACAUCUAUCGUCGUCAGACCAUCAUCAUCUAUCGGCAAGUUGUUCUUGGCUACACCGUGGCUCCUGCUCCUG

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).