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BaseInfo

ncRNA ID zma-miR169k-3p
Species Zea mays
Class miRNA
Genome position chr7:135706179-135706311 [-]
Reference genome RefGen_v2
Source miRBase
Length 18
Mature sequence(if miRNA) 20 - GGCAGUCUCCUUGGCUAG - 37
Stem-loop(if miRNA) -C         ACU    U   -         U    U       GC UC  -   GUC        CG
  GAUGAGAGC   GCUC GGU AGCCAAGGA GACU GCCUGUG  C  CA UCA   GCAGAGGA  C
  |||||||||   |||| ||| ||||||||| |||| |||||||  |  || |||   ||||||||
  CUACUCUCG   CGAG CCG UCGGUUCCU CUGA CGGACGC  G  GU GGU   CGUCUUCU  U
AC         --G    C   A         -    -       UA CU  U   GUU        UG
Stem-loop sequence CGAUGAGAGCACUGCUCUGGUAGCCAAGGAUGACUUGCCUGUGGCCUCCAUCAGUCGCAGAGGACGCUGUUCUUCUGCUUGUGGUUGUCGAUCGCAGGCAGUCUCCUUGGCUAGCCCGAGCGGCUCUCAUCCA

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).