ncRNA ID | zma-miR169k-3p |
Species | Zea mays |
Class | miRNA |
Genome position | chr7:135706179-135706311 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 18 |
Mature sequence(if miRNA) | 20 - GGCAGUCUCCUUGGCUAG - 37 |
Stem-loop(if miRNA) |
-C         ACU    U   -         U    U       GC UC  -   GUC        CG   GAUGAGAGC   GCUC GGU AGCCAAGGA GACU GCCUGUG  C  CA UCA   GCAGAGGA  C   |||||||||   |||| ||| ||||||||| |||| |||||||  |  || |||   ||||||||   CUACUCUCG   CGAG CCG UCGGUUCCU CUGA CGGACGC  G  GU GGU   CGUCUUCU  U AC         --G    C   A         -    -       UA CU  U   GUU        UG |
Stem-loop sequence | CGAUGAGAGCACUGCUCUGGUAGCCAAGGAUGACUUGCCUGUGGCCUCCAUCAGUCGCAGAGGACGCUGUUCUUCUGCUUGUGGUUGUCGAUCGCAGGCAGUCUCCUUGGCUAGCCCGAGCGGCUCUCAUCCA |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |