ncRNA ID | zma-miR156j-3p |
Species | Zea mays |
Class | miRNA |
Genome position | chr7:130652700-130652824 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 18 - UGCUCUCUGCUCUCACUGUCAUC - 40 |
Stem-loop(if miRNA) |
--  A    A   CG  A          -A    -          --A   -A   CC       A   CG GUGG CCU  GG GCGAUGACAG  AGAG AGAGAGCACA   CCC  GCA  AGCGAGG A   || |||| |||  || ||||||||||  |||| ||||||||||   |||  |||  ||||||| A   GC CACC GGA  CC CGCUACUGUC  UCUC UCUCUCGUGU   GGG  CGU  UCGCUCC A AA  -    -   CA  -          AC    G          GCC   AG   CU       G |
Stem-loop sequence | CGAGUGGACCUCGGGAGCGAUGACAGAAGAGAGAGAGCACAACCCAGCACCAGCGAGGAAAAGCCUCGCUUCUGCGAGGGCCGUGUGCUCUCUGCUCUCACUGUCAUCGCCCACAGGCCACCGAA |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |