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BaseInfo

ncRNA ID	ath-miRf10309-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GAAUCAGUUGGGGAGAAAGUA - NA
Stem-loop(if miRNA)	----------CA      U   UUG   -G    AUUAUUUAAGACUUCG             UUCCCU ACU   UCC  CCAA                U             |||||| |||   |||  ||||             GAGGGG UGA   AGG  GAGG                U GUAUUGAUGAAA      U   CUA   AA    GUUUUGUCUCAUAGGU
Stem-loop sequence	CAUUCCCUUACUUUGUCCGCCAAAUUAUUUAAGACUUCGUUUGGAUACUCUGUUUUGGGAGAAGGAAUCAGUUGGGGAGAAAGUAGUUAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001341494.1	ncRNA:21   AUGAAAGAGGGGUUGACUAAG   1   |=||||||||||||||*|||| targets:839   UGCUUUCUCCCCAACUAAUUC   859 Target Full Sequence	1.5	Arabidopsis thaliana Transducin/WD40 repeat-like superfamily protein mRNA	Transducin/WD40 repeat-like superfamily protein(AT4G21520)	coding protein	psRNATarget
NM_118272.5	ncRNA:21   AUGAAAGAGGGGUUGACUAAG   1   |=||||||||||||||*|||| targets:848   UGCUUUCUCCCCAACUAAUUC   868 Target Full Sequence	1.5	Arabidopsis thaliana Transducin/WD40 repeat-like superfamily protein mRNA	Transducin/WD40 repeat-like superfamily protein(AT4G21520)	coding protein	psRNATarget
AY142505.1	ncRNA:21   AUGAAAGAGGGGUUGACUAAG   1   |=||||||||||||||*|||| targets:654   UGCUUUCUCCCCAACUAAUUC   674 Target Full Sequence	1.5	Arabidopsis thaliana unknown protein (At4g21520) mRNA, complete cds	NA	coding protein	psRNATarget
BX826998.1	ncRNA:21   AUGAAAGAGGGGUUGACUAAG   1   |=||||||||||||||*|||| targets:649   UGCUUUCUCCCCAACUAAUUC   669 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget