ncRNA ID | zma-miR171g-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr7:42481791-42481902 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 70 - UAUUGACUUGGCUCAUCUCUC - 90 |
Stem-loop(if miRNA) |
AGA   --  GC       CA        A              CG  CA   CA AA    ACG  AG  GACAUGG  UGGUAUUG CUUGGCUCAUCUCU  CC  CAC  G  U    |||  ||  |||||||  |||||||| ||||||||||||||  ||  |||  |    UGC  UC  CUGUACU  ACUAUAAC GAGCCGAGUGGAGG  GG  GUG  C  C ---   GA  UA       UC        C              -A  CC   AA AC |
Stem-loop sequence | AGAACGAGGCGACAUGGCAUGGUAUUGACUUGGCUCAUCUCUCGCCCACACCAGAAUCCACAAGUGCCGGAGGAGGUGAGCCGAGCCAAUAUCACUUCAUGUCAUCUAGCGU |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |