ncRNA ID | zma-miR399f-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr6:159686859-159686963 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 62 - GGGCAACUUCUCCUUUGGCAGA - 83 |
Stem-loop(if miRNA) |
CAGGA      CC  C     U      C  C           ---AU    GA      UGUGCA  UG AUUUC GGGCAA UU UCCUUUGGCAG     GCGC  G      ||||||  || ||||| |||||| || |||||||||||     ||||      ACACGU  AC UAAGG CCCGUU AA AGGAAACCGUC     CGUG  A -ACGA      CU  U     C      U  -           GUCAC    UA |
Stem-loop sequence | CAGGAUGUGCACCUGCAUUUCUGGGCAACUUCUCCUUUGGCAGAUGCGCGAGAAUGUGCCACUGCUGCCAAAGGAAAUUUGCCCCGGAAUUCAUCUGCACAAGCA |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |