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BaseInfo

ncRNA ID zma-miR399f-5p
Species Zea mays
Class miRNA
Genome position chr6:159686859-159686963 [-]
Reference genome RefGen_v2
Source miRBase
Length 22
Mature sequence(if miRNA) 62 - GGGCAACUUCUCCUUUGGCAGA - 83
Stem-loop(if miRNA) CAGGA      CC  C     U      C  C           ---AU    GA
     UGUGCA  UG AUUUC GGGCAA UU UCCUUUGGCAG     GCGC  G
     ||||||  || ||||| |||||| || |||||||||||     ||||
     ACACGU  AC UAAGG CCCGUU AA AGGAAACCGUC     CGUG  A
-ACGA      CU  U     C      U  -           GUCAC    UA
Stem-loop sequence CAGGAUGUGCACCUGCAUUUCUGGGCAACUUCUCCUUUGGCAGAUGCGCGAGAAUGUGCCACUGCUGCCAAAGGAAAUUUGCCCCGGAAUUCAUCUGCACAAGCA

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).