| ncRNA ID | zma-miR164b-3p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr6:141610040-141610167 [+] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 20 |
| Mature sequence(if miRNA) | 93 - AUGUGCCCAUCUUCUCCACC - 112 |
| Stem-loop(if miRNA) |
U GGC G CA G -UU ---AUG G G AGACGGU UGUGC UGGUGGAGAAG GGGCACGU CA ACCAUCCA CCGCC G U ||||||| ||||| ||||||||||| |||||||| || |||||||| ||||| | G UCUGUCA GCACG GCCACCUCUUC CCCGUGUA GU UGGUAGGU GGUGG U G U --A A UA - UCU AGGUAA G G |
| Stem-loop sequence | UAGACGGUGGCUGUGCGUGGUGGAGAAGCAGGGCACGUGCAUUACCAUCCAAUGCCGCCGGGUGGGUGGGUGGAAUGGAUGGAUGGUUCUUGAUGUGCCCAUCUUCUCCACCGAGCACGAACUGUCUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_001176164.1 |
|
2.0 | Zea mays putative protein kinase superfamily protein (LOC100383516), mRNA | NA | coding protein | psRNATarget | |||||||||
| BT067462.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFc0060H22 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| XM_020545185.1 |
|
2.0 | PREDICTED: Zea mays putative protein kinase superfamily protein (LOC100383516), transcript variant X1, mRNA | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |