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BaseInfo

ncRNA ID zma-miR164g-3p
Species Zea mays
Class miRNA
Genome position chr6:138306590-138306760 [-]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 2 - CACGUGCUCCCCUUCUCCACC - 22
Stem-loop(if miRNA) --U        CA            A  CACGCC     --     ---     C      ACCGACCUCCCAAACCUGCCUUAUGGUGUGG
   UGGAGAAG  GGGCACGUGCAG GA      GGAGC  ACGGC   CGCCG CGAUCU                               G
   ||||||||  |||||||||||| ||      |||||  |||||   ||||| ||||||
   ACCUCUUC  CUCGUGCACGUC CU      CCUCG  UGUUG   CUUCG UUGUUG                               G
ACC        CC            -  ------     AU     UAG     -      CUGUCGAUAGCGAAGGUGGCUGCUGGAGGUG
Stem-loop sequence UUGGAGAAGCAGGGCACGUGCAGAGACACGCCGGAGCACGGCCGCCGCCGAUCUACCGACCUCCCAAACCUGCCUUAUGGUGUGGGGGUGGAGGUCGUCGGUGGAAGCGAUAGCUGUCGUUGUUGCUUCGAUGUUGUUAGCUCCUCCUGCACGUGCUCCCCUUCUCCACCA

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).