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BaseInfo

ncRNA ID	zma-miR156k-3p
Species	Zea mays
Class	miRNA
Genome position	chr6:96127864-96127986 [-]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	18 - GCUCGCUUCUCUUUCUGUCAGC - 39
Stem-loop(if miRNA)	GG      CCC   ---    AU        -    -        C     C  C   C      G   CUUAGG   CGA   AGAG  UGACAGAA GAGA GCGAGCAC UGGCG GG GAC GGCAUG A   ||||||   |||   ||||  |||||||| |||| |||||||| ||||| || ||| |||||| A   GAGUCC   GCU   UCUC  ACUGUCUU CUCU CGCUCGUG GCCGC CC CUG CCGUAC C --      --U   CCC    CG        U    U        C     -  -   -      G
Stem-loop sequence	GGCUUAGGCCCCGAAGAGAUUGACAGAAGAGAGCGAGCACCUGGCGCGGCGACCGGCAUGGAACGCAUGCCGUCCCCGCCGCGUGCUCGCUUCUCUUUCUGUCAGCCUCUCCCUCGUCCUGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI408583.1	ncRNA:22   CGACUGUCUUUCUCUUCGCUCG   1   |||||||||||||||||=|||| targets:8   GCUGACAGAAAGAGAAGUGAGC   29 Target Full Sequence	1.5	Sequence 6708 from Patent EP2074227	NA	coding protein	psRNATarget
JB169044.1	ncRNA:22   CGACUGUCUUUCUCUUCGCUCG   1   |||||||||||||||||=|||| targets:8   GCUGACAGAAAGAGAAGUGAGC   29 Target Full Sequence	1.5	Sequence 6708 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240713.1	ncRNA:22   CGACUGUCUUUCUCUUCGCUCG   1   |||||||||||||||||=|||| targets:8   GCUGACAGAAAGAGAAGUGAGC   29 Target Full Sequence	1.5	Sequence 6708 from Patent EP2985353	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).