| ncRNA ID | zma-miR160c-3p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr6:9144627-9144726 [+] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 76 - GCGUGCAUGGUGCCAAGCAUA - 96 |
| Stem-loop(if miRNA) |
A C U C CU A AACGACAGCU GGAUGUGC UGGC CC UGUAUGCCA CAUCU GAGC U |||||||| |||| || ||||||||| ||||| |||| UCUAUACG ACCG GG ACGUGCGGU GUAGA UAUC G C A U U AG A CGUUGGGAUG |
| Stem-loop sequence | AGGAUGUGCCUGGCUCCCUGUAUGCCACUCAUCUAGAGCAACGACAGCUUGGUAGGGUUGCCUAUAAGAUGGAUGGCGUGCAUGGUGCCAAGCAUAUCUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008646281.2 |
|
2.5 | PREDICTED: Zea mays lysosomal beta glucosidase-like (LOC103625882), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_008646279.2 |
|
2.5 | PREDICTED: Zea mays lysosomal beta glucosidase-like (LOC103625882), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| NM_001346595.1 |
|
2.5 | Zea mays lysosomal beta glucosidase-like (LOC103625882), mRNA | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |