ncRNA ID | ath-miRf10306-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GUCACUUCCAGACCAGCGAG - NA |
Stem-loop(if miRNA) |
   AGAC       CU  CGA            -A    AAG    UC  U GGC    UUCUCGU  UG   UGGAGGUGAUUA  UCUC   UUCG  GA A |||    |||||||  ||   ||||||||||||  ||||   ||||  || CCG    AGGAGCG  AC   ACCUUCACUGGU  AGGG   AAGC  CU C    GAAA       --  CAG            AC    GGG    UA  C |
Stem-loop sequence | GGCAGACUUCUCGUCUUGCGAUGGAGGUGAUUAAUCUCAAGUUCGUCGAUACCUCAUCGAAGGGGGGACAUGGUCACUUCCAGACCAGCGAGGAAAAGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BX819576.1 |
|
2.5 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget | |||||||||
AY120739.1 |
|
2.5 | Arabidopsis thaliana unknown protein (At2g18900) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_127446.4 |
|
2.5 | Arabidopsis thaliana Transducin/WD40 repeat-like superfamily protein mRNA | Transducin/WD40 repeat-like superfamily protein(AT2G18900) | coding protein | psRNATarget |