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BaseInfo

ncRNA ID ath-miRf10306-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUCACUUCCAGACCAGCGAG - NA
Stem-loop(if miRNA)    AGAC       CU  CGA            -A    AAG    UC  U
GGC    UUCUCGU  UG   UGGAGGUGAUUA  UCUC   UUCG  GA A
|||    |||||||  ||   ||||||||||||  ||||   ||||  ||
CCG    AGGAGCG  AC   ACCUUCACUGGU  AGGG   AAGC  CU C
   GAAA       --  CAG            AC    GGG    UA  C
Stem-loop sequence GGCAGACUUCUCGUCUUGCGAUGGAGGUGAUUAAUCUCAAGUUCGUCGAUACCUCAUCGAAGGGGGGACAUGGUCACUUCCAGACCAGCGAGGAAAAGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BX819576.1
ncRNA:20   GAGCGACCAGACCUUCACUG   1
  ||=|||||||||||||*|||
targets:681   CUUGCUGGUCUGGAAGAGAC   700

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY120739.1
ncRNA:20   GAGCGACCAGACCUUCACUG   1
  ||=|||||||||||||*|||
targets:2255   CUUGCUGGUCUGGAAGAGAC   2274

2.5 Arabidopsis thaliana unknown protein (At2g18900) mRNA, complete cds NA coding protein psRNATarget
NM_127446.4
ncRNA:20   GAGCGACCAGACCUUCACUG   1
  ||=|||||||||||||*|||
targets:2306   CUUGCUGGUCUGGAAGAGAC   2325

2.5 Arabidopsis thaliana Transducin/WD40 repeat-like superfamily protein mRNA Transducin/WD40 repeat-like superfamily protein(AT2G18900) coding protein psRNATarget