ncRNA ID | zma-miR162-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr5:182040463-182040592 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 108 - GGGCGCAGUGGUUUAUCGAUC - 128 |
Stem-loop(if miRNA) |
    GC    U            UC     U  C    -G   - UCCGGCCGGGAGUGGUGGUU CUGG  GCAG GGUUUAUCGAUC  UUCCU GC UUGU  CUG G                    C ||||  |||| ||||||||||||  ||||| || ||||  ||| |                    A GACC  CGUC CCAAAUAGCUGG  AAGGG CG AACA  CGC C                    A     UA    U            CU     -  C    AA   U GACGACGUUGUUAUUUUGCG |
Stem-loop sequence | CUGGGCGCAGUGGUUUAUCGAUCUCUUCCUUGCCUUGUGCUGGUCCGGCCGGGAGUGGUGGUUCAAGCGUUUUAUUGUUGCAGCAGCUCGCAAACAACGCGGGAAUCGGUCGAUAAACCUCUGCAUCCAG |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |