ncRNA ID | zma-miR827-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr5:167348212-167348333 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 100 - UUUGUUGGUGGUCAUUUAACC - 120 |
Stem-loop(if miRNA) |
-GU                           GCUU     GAUGGAUUGGUGCAUGCAUGG    UUUGUUGGUGGUCAUUUAACCAUGCAU    CGAUC                     A    |||||||||||||||||||||||||||    |||||                     U    AAACGACUACCAGUAGAUUGGUACGUG    CGCGG                     U UAC                           ACUA     UGUACGUAGUGUGAUACGUUA |
Stem-loop sequence | GUUUUGUUGGUGGUCAUUUAACCAUGCAUGCUUCGAUCGAUGGAUUGGUGCAUGCAUGGAUUAUUGCAUAGUGUGAUGCAUGUGGCGCAUCAGUGCAUGGUUAGAUGACCAUCAGCAAACAU |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |