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BaseInfo

ncRNA ID zma-miR169f-3p
Species Zea mays
Class miRNA
Genome position chr5:164711362-164711511 [+]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 113 - GGCAUGUCUUCCUUGGCUACU - 133
Stem-loop(if miRNA) --  C       A    UUC            U   U      G -         --AUG   UAUGGCUACAUGCCU
  AC AGAGCUG UUCG   AGUAGCCAAGGA GAC UGCCUA G UAUAUAUGC     GGC               G
  || ||||||| ||||   |||||||||||| ||| |||||| | |||||||||     |||
  UG UCUCGGC AGGC   UCAUCGGUUCCU CUG ACGGAU U AUAUGUACG     CAG               A
AC  A       G    ---            U   U      G G         AGUCG   UGUUCUCUGACCGAG
Stem-loop sequence ACCAGAGCUGAUUCGUUCAGUAGCCAAGGAUGACUUGCCUAGGUAUAUAUGCAUGGGCUAUGGCUACAUGCCUGAGAGCCAGUCUCUUGUGACGCUGAGCAUGUAUAGUGUAGGCAUGUCUUCCUUGGCUACUCGGAGCGGCUCUAGUCA

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).