ncRNA ID | zma-miR169f-3p |
Species | Zea mays |
Class | miRNA |
Genome position | chr5:164711362-164711511 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 113 - GGCAUGUCUUCCUUGGCUACU - 133 |
Stem-loop(if miRNA) |
--  C       A    UUC            U   U      G -         --AUG   UAUGGCUACAUGCCU   AC AGAGCUG UUCG   AGUAGCCAAGGA GAC UGCCUA G UAUAUAUGC     GGC               G   || ||||||| ||||   |||||||||||| ||| |||||| | |||||||||     |||   UG UCUCGGC AGGC   UCAUCGGUUCCU CUG ACGGAU U AUAUGUACG     CAG               A AC  A       G    ---            U   U      G G         AGUCG   UGUUCUCUGACCGAG |
Stem-loop sequence | ACCAGAGCUGAUUCGUUCAGUAGCCAAGGAUGACUUGCCUAGGUAUAUAUGCAUGGGCUAUGGCUACAUGCCUGAGAGCCAGUCUCUUGUGACGCUGAGCAUGUAUAGUGUAGGCAUGUCUUCCUUGGCUACUCGGAGCGGCUCUAGUCA |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |